Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3142g00014 ATGCAGACCTACCTGCTGCTCTTCATTGGTCTCTCTCTTTTTTTTGCTGAGGGAGCTCAAGCTGCAGCAGATGATGAATTGTCAACTCTGCTATCAATCAAATCCAGTCTCATTTATTCAATGAATTCTTTGAATGATTGGCAACTATCAAGAAATGTGACACAGCAAGGTTCACCCCATTGCAACTGGACTGGAGTTGGTTGCAACTCTCAAGGCTTCATAGAGAGTCTTGACCTCTCCAACATGAACCTTAGTGGTCGGGTTTCAGATCACATCCAATCCCTTTCAAGTCTATCTTTTTTCAACATAAGCTGTAACAACTTTGCTTCATCACTTCCCAAATCATTGTTCAACCTCACCTCCTTAAAGAGCTTTGATGTGAGCCAGAACTACTTCACTGGCACCTTTCCAACTGGACTTGGAAGAGCTGCAGGATTGATATCAATTAATGCATCAAGCAATGACTTTTCTGGTTTTCTTCCTGAAGATATTGGAAATGCAACATTGCTCGAGAGCCTTGATTTTCGAGGGAGTTACTTTGTAAGTTCAATCCCCAGGAGTTTTAAGAATTTGAAGAAGCTCAAATTTCTAGGCCTTTCAGGAAATAACTTCACTGGGGGGATTCCAGAATATCTTGGGGAACTCATATCTCTGGAGACATTAATTCTAGGATACAACGAGTTTGAAGGTGAGATCCCTGCAGAGTTTGGCAACCTCACCAATCTTCAATACCTTGACTTGGCTGTGGGAACTCTCAGTGGACAAATTCCACCTGAATTGGGTAAGCTGAAAAAACTCACTACAATTTACTTGTACCATAACAACTTCACAGGAAAAATTCCACCTCAACTTGGCAACATTACTGCACTAGCATTTTTGGACCTCTCTGACAATCAGATTTCAGGAGAGATTCCAGAAGAACTTGCTAAATTGGAAAACCTGCAGCTCTTGAATTTGATGAGCAACAAACTAACTGGTCCTGTACCAGAGAGGCTTGGGGAATTGAAAAATTTACAGGTGCTTGAGCTATGGAAAAATTCTTTAGAAGGTCCTTTGCCACTAAACCTTGGAAAGAACTCTCCTTTGCAGTGGTTGGATGTGTCCTCTAACTCATTATCTGGTGAGATCCCTCCAGGTTTGTGTAATGCAGGCAATCTCACTAAACTAATCCTCTTCAACAATTCCTTCTCTGGTTCCATTCCAAGTGGACTTTCAAACTGTTTGTCTTTGGTACGTGTTCGGATTCAGAACAATCTTATTTCCGGAACTATTCCAGTGGGGTTTGGAAACCTCCCAGGCCTTCAACGGCTGGAGATGGCAAAGAACAACCTCACTGGGCAAATTCCACTAGAAATTGCCTCATCCACATCCCTCTCTTTCATTGATGTATCTTGGAACCACCTTGAATCATCTCTACCTTCAGAAATTCTTTCTATTCCAACCCTTCAAACCTTCATTGCCTCTCACAACAACATTCGAGGAAATATCCCACAAGAGTTCCAGGACTGTCCATCTCTCTCTGTGCTGGATCTTTCCAACACTTATATCTCTGGTACAATCCCAGAAAGTATTGCTTCTTGTCAAAAATTAGTCAACCTTAACCTTCGAAACAACCAGTTGACTGGTGGAATCCCGAAATCAATCACAAACATGCCCACCTTGTCTGTTCTTGATCTGTCCAACAATTCGCTGACTGGGAGGATACCTGACAACTTTGGCAGTTCCCCAGCTCTGGAAATGCTGAACCTGTCCTATAACAAACTTGAGGGACCAGTACCCTCAAATGGGATTCTAGTGACCATAAGTCCTAGTGATCTTATCGGCAATGAGGGTCTTTGCGGAGGCGTTCTCCCTCCATGCTCTCACAGTTTGACTGTGAAAAGCCGAAAAAGGAGCTCACATGTCAGACACATCATTATTGGTTTTGTGACTGGAATATCAGTGATTTTGTCTCTTGGTGCAGCATATTTTGGTGTTAAATGGTTATACAAGAGATGGTACTTGTATAACAATTCCGTCCATGATTGGTTCAAACAGAGCAGTGAAGATTGGCCCTGGAGGTTAGTAGCATTCCAGAGGATCAGTTTCACTAGTAGTGAGATCCTAACTTGCATAAAAGAATCAAATGTCATAGGCATGGGTGGCACTGGTATTGTTTACAAAGCTGAAATCCATAGACCTCATGTGACGGTAGCAGTGAAGAAACTATGGAGACCACAGGAAGACACAGAAAATGGTAATCATGTATTAAGAGAGGTGGAACTCCTAGGGAGACTTAGGCATAGGAATATTGTAAGGCTATTGGGGTATGTGCATAACGAAAGGGAAGTGATGATTGTTTACGAGTACATGCCTAACGGGAATCTTGGGACTGCATTGCATGGTGAACAATCTGAAAGGTTGCTTGTAGACTGGGTATCAAGGTACAACATTGCTCTTGGAGTTGCACAAGGGCTGAACTACCTCCATCATGATTGTCACCCACCAGTTATTCACAGGGATATCAAGTCTAACAACATTCTACTTGATGCAAATTTGGAGGCAAGGATAGCTGATTTCGGTTTGGCAAGGATGATGATCCAAAAGAATGAGACAGTTTCAATGGTGGCGGGATCTTATGGATATATCGCACCAGAATATGGATACACTCTGAAGGTTGACGAGAAGATTGACATATACAGTTATGGGGTGGTACTTTTGGAGCTCCTAACTGGCAAAATGCCGTTAGACCCTGCGTTTGGAGAATCTGTGAACATAGTCGAATGGATACGGAAGAAGAGAACCAACAAAGCCTTGTTAGAAGCACTAGATTCCACCATAGCTGGTCAGTGCAAACATGTCCAAGAAGAGATGCTTCTTGTACTCCGGATTGCACTTCTATGTACTGCAAAGCTTCCCAAGGAAAGACCATCCATGAGAGACATTATATCAATGCTTGGAGAGGCAAAGCCAAGAAGGAAAAGCGTTTGCCGTAATGAGGGACAAGACAGTACCATGGAAAAGTCAACAATCTTCATCACCTCCCCAATAGTAAGCCTTTTATAA 3045 0.4256 MQTYLLLFIGLSLFFAEGAQAAADDELSTLLSIKSSLIYSMNSLNDWQLSRNVTQQGSPHCNWTGVGCNSQGFIESLDLSNMNLSGRVSDHIQSLSSLSFFNISCNNFASSLPKSLFNLTSLKSFDVSQNYFTGTFPTGLGRAAGLISINASSNDFSGFLPEDIGNATLLESLDFRGSYFVSSIPRSFKNLKKLKFLGLSGNNFTGGIPEYLGELISLETLILGYNEFEGEIPAEFGNLTNLQYLDLAVGTLSGQIPPELGKLKKLTTIYLYHNNFTGKIPPQLGNITALAFLDLSDNQISGEIPEELAKLENLQLLNLMSNKLTGPVPERLGELKNLQVLELWKNSLEGPLPLNLGKNSPLQWLDVSSNSLSGEIPPGLCNAGNLTKLILFNNSFSGSIPSGLSNCLSLVRVRIQNNLISGTIPVGFGNLPGLQRLEMAKNNLTGQIPLEIASSTSLSFIDVSWNHLESSLPSEILSIPTLQTFIASHNNIRGNIPQEFQDCPSLSVLDLSNTYISGTIPESIASCQKLVNLNLRNNQLTGGIPKSITNMPTLSVLDLSNNSLTGRIPDNFGSSPALEMLNLSYNKLEGPVPSNGILVTISPSDLIGNEGLCGGVLPPCSHSLTVKSRKRSSHVRHIIIGFVTGISVILSLGAAYFGVKWLYKRWYLYNNSVHDWFKQSSEDWPWRLVAFQRISFTSSEILTCIKESNVIGMGGTGIVYKAEIHRPHVTVAVKKLWRPQEDTENGNHVLREVELLGRLRHRNIVRLLGYVHNEREVMIVYEYMPNGNLGTALHGEQSERLLVDWVSRYNIALGVAQGLNYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLARMMIQKNETVSMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELLTGKMPLDPAFGESVNIVEWIRKKRTNKALLEALDSTIAGQCKHVQEEMLLVLRIALLCTAKLPKERPSMRDIISMLGEAKPRRKSVCRNEGQDSTMEKSTIFITSPIVSLL 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3142g00014 1014 SUPERFAMILY RNI-like 252 594 - -
Gabi3142g00014 1014 Pfam Protein kinase domain 707 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3142g00014 1014 SUPERFAMILY L domain-like 32 349 - -
Gabi3142g00014 1014 Gene3D Ribonuclease Inhibitor 309 624 IPR032675 -
Gabi3142g00014 1014 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 23 178 - -
Gabi3142g00014 1014 FunFam MDIS1-interacting receptor like kinase 1 788 998 - -
Gabi3142g00014 1014 Gene3D Transferase(Phosphotransferase) domain 1 788 1005 - -
Gabi3142g00014 1014 PANTHER RECEPTOR-LIKE PROTEIN 55 431 980 - -
Gabi3142g00014 1014 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 364 624 - -
Gabi3142g00014 1014 ProSitePatterns Protein kinases ATP-binding region signature. 711 735 IPR017441 GO:0005524
Gabi3142g00014 1014 SUPERFAMILY Protein kinase-like (PK-like) 697 979 IPR011009 -
Gabi3142g00014 1014 Gene3D Phosphorylase Kinase; domain 1 704 787 - -
Gabi3142g00014 1014 Gene3D Ribonuclease Inhibitor 255 308 IPR032675 -
Gabi3142g00014 1014 Gene3D Ribonuclease Inhibitor 25 145 IPR032675 -
Gabi3142g00014 1014 Gene3D Ribonuclease Inhibitor 146 254 IPR032675 -
Gabi3142g00014 1014 PRINTS Leucine-rich repeat signature 290 303 - -
Gabi3142g00014 1014 PRINTS Leucine-rich repeat signature 551 564 - -
Gabi3142g00014 1014 SMART serkin_6 705 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3142g00014 1014 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 179 279 - -
Gabi3142g00014 1014 Coils Coil 1011 1014 - -
Gabi3142g00014 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 830 842 IPR008271 GO:0004672|GO:0006468
Gabi3142g00014 1014 FunFam Leucine-rich repeat receptor protein kinase EMS1 280 363 - -
Gabi3142g00014 1014 Pfam Leucine rich repeat 529 588 IPR001611 GO:0005515
Gabi3142g00014 1014 Pfam Leucine rich repeat N-terminal domain 23 69 IPR013210 -
Gabi3142g00014 1014 ProSiteProfiles Protein kinase domain profile. 705 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3142g00014 1014 FunFam MDIS1-interacting receptor like kinase 1 705 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3142g00014 Gabi-Chr3142 141890 145249 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3142g00014 4 1014 Receptor kinase-like Gene Family AT1G08590 64.237 0.0 1301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gabi3142g00014 Pkinase 1.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3142g00014 - - gmx:100793873 1701.8