Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3137g00015 ATGGCACGCTTATCCAGGTCCTCCGCCCCGCGCCTCCTCTATGCGCTCTGCTCCTCTTCCCCGGCGTCGCCGTCGACGTCGACGGCGGCATCCCTTCTCGCCGGTGCTTTCCATCTCAGACACTTCTCAGCCGGGAACCTGGCGCGCGCGAATGCGGCAGCGGATAAGGAGCCGTGGTGGAAGGAGTCGATGGAGCGGCTGCGCAACATCGGGATCTCGGCACACATCGACTCCGGGAAGACGACACTGACGGAGCGGGTTCTGTATTACACGGGTCGGATCCACGAGATCCACGAGGTGAGGGGCAGGGATGGTGTTGGCGCCAAGATGGACTCTATGGATTTGGAGAGGGAGAAGGGGATTACCATTCAGTCAGCTGCCACTTATTGCACTTGGAAAGACTATAAGATTAACATAATTGACACACCTGGTCATGTTGATTTCACCATTGAGGTTGAGAGGGCTTTGCGTGTCCTTGATGGTGCCATTCTTGTACTTTGTAGTGTTGGTGGGGTGCAAAGTCAGTCCATTACTGTTGATCGGCAAATGAGAAGATATGAGGTTCCAAGGCTTGCATTTATCAACAAGCTTGATCGGATGGGAGCTGATCCGTGGAAAGTTTTAAATCAGGCAAGATCTAAGCTTCGGCATCACAGTGCTGCAATGCAAGTTCCTATAGGCTTGGAAGATGATTTTAAGGGACTTGTTGATCTTGTGCAATTAAAGGCCTACTACTTTCATGGTTCAAATGGTGAAAAAGTTGTCGCTGAAGAAGTGCCTGCAGATATGGAAGCCTTGGTGGCAGAAAAAAGACGTGAACTCATAGAAAGTGTGTCAGAGGTTGACGATAAACTTGCTGAAGCTTTCCTTGGTGATGAGACCATATCAGCTGCTGATCTTAAGGAAGCAGTTCGTAGGGCTACCATAGCACAGAAATTTATACCAGTATTCATGGGTAGTGCTTTCAAAAATAAGGGTGTGCAGCCACTTCTGGATGGTGTAATTAATTATTTACCATGTCCAATTGAAGTTTGTAATTACGCCCTTGACCAAACTAAGAATGAAGAGAAGGTTGAGTTGCGTGGAAGTCCTGATGGGCCACTTGTGGCATTGGCTTTCAAGTTGGAGGAAGGGCGATTTGGTCAGTTAACATATCTAAGAATCTACGAGGGTGTCATTCGGAAGGGTGATTTTATTATTAATGTAAACACCGGAAAGAAGATCAAGGTTCCTCGCTTGGTTCGGATGCATTCGAATGAGATGGAGGACATTCAAGAGGCTCATGCTGGTCAAATAGTTGCTGTATTTGGTGTTGATTGTGCATCTGGAGATACTTTTACTGATGGGTCAGTTAGATACACAATGACTTCGATGAATGTTCCTGAACCAGTGATGTCATTAGCTGTACAGCCGGTCTCAAAAGATTCTGGAGGGCAATTTTCAAAAGCTTTGAATCGCTTCCAAAGGGAGGATCCTACTTTCCGTGTTGGCTTGGACCCAGAGAGTGGGCAGACGATCATTTCTGGAATGGGGGAACTGCATTTAGATATCTATGTTGAACGCATTAAGAGAGAGTATAAGGTTGATGCATCAGTTGGAAAGCCCCGTGTGAACTTCAGAGAAACTGTTACTCAACATGCTGATTTTGATTATTTACATAAGAAGCAAACAGGAGGGCAGGGACAATATGGACGGGTTATTGGGTATATTGAACCACTTCCTGCAGGGTCACCGACTAAGTTTGAATTTGAAAACATTCTTGTTGGTCAAGCTATTCCATCAAGTTTTATCCCAGCAATTGAGAAGGGTTTCAAAGAAGCTGCCAACTCATGGTGCTGCCCATGCTGTTGA 1851 0.4668 MARLSRSSAPRLLYALCSSSPASPSTSTAASLLAGAFHLRHFSAGNLARANAAADKEPWWKESMERLRNIGISAHIDSGKTTLTERVLYYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATYCTWKDYKINIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLNQARSKLRHHSAAMQVPIGLEDDFKGLVDLVQLKAYYFHGSNGEKVVAEEVPADMEALVAEKRRELIESVSEVDDKLAEAFLGDETISAADLKEAVRRATIAQKFIPVFMGSAFKNKGVQPLLDGVINYLPCPIEVCNYALDQTKNEEKVELRGSPDGPLVALAFKLEEGRFGQLTYLRIYEGVIRKGDFIINVNTGKKIKVPRLVRMHSNEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVRYTMTSMNVPEPVMSLAVQPVSKDSGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIKREYKVDASVGKPRVNFRETVTQHADFDYLHKKQTGGQGQYGRVIGYIEPLPAGSPTKFEFENILVGQAIPSSFIPAIEKGFKEAANSWCCPCC 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3137g00015 616 CDD mtEFG1_II_like 368 448 - -
Gabi3137g00015 616 Pfam Elongation Factor G, domain III 460 534 IPR041095 -
Gabi3137g00015 616 Pfam Elongation factor G, domain IV 535 609 IPR005517 GO:0005525
Gabi3137g00015 616 FunFam Elongation factor G 464 540 - -
Gabi3137g00015 616 Gene3D Translation factors 349 466 - -
Gabi3137g00015 616 Gene3D - 54 344 IPR027417 -
Gabi3137g00015 616 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 65 342 IPR000795 GO:0003924|GO:0005525
Gabi3137g00015 616 NCBIfam small GTP-binding protein domain 67 239 IPR005225 GO:0005525
Gabi3137g00015 616 SMART EFG_IV_2 536 614 IPR005517 GO:0005525
Gabi3137g00015 616 PRINTS GTP-binding elongation factor signature 69 82 IPR000795 GO:0003924|GO:0005525
Gabi3137g00015 616 PRINTS GTP-binding elongation factor signature 118 126 IPR000795 GO:0003924|GO:0005525
Gabi3137g00015 616 PRINTS GTP-binding elongation factor signature 190 199 IPR000795 GO:0003924|GO:0005525
Gabi3137g00015 616 PRINTS GTP-binding elongation factor signature 138 148 IPR000795 GO:0003924|GO:0005525
Gabi3137g00015 616 PRINTS GTP-binding elongation factor signature 154 165 IPR000795 GO:0003924|GO:0005525
Gabi3137g00015 616 SUPERFAMILY Translation proteins 306 458 IPR009000 -
Gabi3137g00015 616 SUPERFAMILY EF-G C-terminal domain-like 458 535 IPR035647 -
Gabi3137g00015 616 Gene3D Elongation Factor G (Translational Gtpase), domain 3 467 540 - -
Gabi3137g00015 616 SUPERFAMILY Ribosomal protein S5 domain 2-like 535 609 IPR020568 -
Gabi3137g00015 616 Hamap Elongation factor G [fusA]. 63 611 IPR004540 GO:0003746|GO:0005525|GO:0006414
Gabi3137g00015 616 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 339 IPR027417 -
Gabi3137g00015 616 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 3 610 - -
Gabi3137g00015 616 Pfam Elongation factor Tu domain 2 381 447 IPR004161 GO:0005525
Gabi3137g00015 616 CDD EF-G 69 341 - -
Gabi3137g00015 616 Pfam Elongation factor Tu GTP binding domain 66 339 IPR000795 GO:0003924|GO:0005525
Gabi3137g00015 616 FunFam Elongation factor G, mitochondrial 58 345 - -
Gabi3137g00015 616 CDD EFG_III 461 536 IPR009022 -
Gabi3137g00015 616 Gene3D - 541 613 IPR014721 -
Gabi3137g00015 616 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 111 126 IPR031157 -
Gabi3137g00015 616 FunFam Elongation factor G, mitochondrial 350 463 - -
Gabi3137g00015 616 NCBIfam elongation factor G 63 609 IPR004540 GO:0003746|GO:0005525|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3137g00015 Gabi-Chr3137 369420 430571 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3137g00015 383 543 Eukaryotic Initiation Factors Gene Family AT3G22980 26.404 2.35e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3137g00015 K02355 - gmx:100783315 1117.83