Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3137g00001 ATGGGACTAAGTGGCTTGATTAATGTAGACACCCTGCTGGAATTGTCCAATTTCAACAGTTTTAGTGTCATTAACAATAGCTTTGAGGGTCCAATGCATGCATTCAAGAAGCTTGAGAGTTTAAGGGCATTGTTTCTGAGCAATAACAAATTCTCTGGTGATATTCTTGACGATGCTTTTGATGGGATGGGACCCCTGAAGAGAGTATTCTTGGTAGAAAACGGATTCACGGGTCATATTCCTACATCCCTTGCTAATTTGCCTGGGCTTTTGGAAGTGAACTTGCATGGAAATAGATTTGAAGTTTCTAGTGAAGTGTTGGAATTCCAACATGAAGTCAGATCCTCTGAGGTGACAGCTGAATCCAAGGTCATGGTTTTGAATGGACCAGTTATGGTCGTGAAGAGGTTTCAACATATGAACAATCTTGGGAAAAAAGAATTCTTTGAGCACATGAAAAGGCTTGGAAGGTTGACACATCCCAATCTACTCCCTCCTGTTGCTTTCTTTTACAACGAAGAAGATAAGCTTTTGGTTCATGACTTTGTTGAAAATGGCAGCTTGGCTAGTCATCTCCATGGTATGACATAA 591 0.4061 MGLSGLINVDTLLELSNFNSFSVINNSFEGPMHAFKKLESLRALFLSNNKFSGDILDDAFDGMGPLKRVFLVENGFTGHIPTSLANLPGLLEVNLHGNRFEVSSEVLEFQHEVRSSEVTAESKVMVLNGPVMVVKRFQHMNNLGKKEFFEHMKRLGRLTHPNLLPPVAFFYNEEDKLLVHDFVENGSLASHLHGMT 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3137g00001 196 Gene3D Transferase(Phosphotransferase) domain 1 109 196 - -
Gabi3137g00001 196 SUPERFAMILY Protein kinase-like (PK-like) 125 195 IPR011009 -
Gabi3137g00001 196 Gene3D Ribonuclease Inhibitor 1 108 IPR032675 -
Gabi3137g00001 196 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 123 194 IPR046959 -
Gabi3137g00001 196 SUPERFAMILY L domain-like 3 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3137g00001 Gabi-Chr3137 38924 51881 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3137g00001 120 193 Receptor kinase-like Gene Family AT5G35390 60.811 9.61e-23 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gabi3137g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3137g00001 - - ccaj:109790244 157.147