Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3130g00001 ATGGAAAATCTTTCTCCTAAGAAAAACAACATAGATACCAACAGTTCCTCCCTCAACGTGGAGGAGGCTGCACAACCGGAACCCAGCCCTCTTCGAAAGATGATCGCTGTGGCATCCATCGCCGCCGGGATACAATTCGGGTGGGCCCTACAACTCTCCTTATTAACCCCATACGTCCAGCTGCTCGGCGTGCCACATAAATGGGCCGCCTTCATCTGGCTTTGCGGCCCAATCTCCGGCCTGCTTGTCCAGCCCATCGTTGGTTACTGCAGCGACCGTTGCACTTCCCGTTTCGGCCGCCGCCGTCCCTTCATCTTATCCGGCGCACTCGCCGTCGCAATCGCCGTCTTCCTAATCGGCTATGCCGCCGACCTCGGCCACTCATTCGGCGACGACCTCACCAAAAAAACCCGCCCCCGCGCCGTCGCCATCTTCGTCACCGGCTTCTGGATCCTCGACGTGGCCAACAACATGTTACAGGGACCCTGCCGTGCTTTCCTCGGCGACCTCGCCGCCGGCGACCACCGGAAAACCAGAACCGCAAACGCCTTCTTCTCCTTCTTCATGGCCATAGGCAACGTCCTTGGCTACGCCGCCGGATCCTACAGCCACCTCCACAAAATCTTCCCCTTCACCGAAACCAAAGCCTGTGATGTCTTCTGTGCTAATCTCAAGAGTTGTTTCTTCTTCTCAATCTTTCTCCTCCTCGTCCTCACAATAATCGTGCTTACTTACGTAAAAGATCGCCCGATTATTAAAACATCAGGCGGTGGTAATGACAACGAGAACGAGGAATCGGCGATTTCATGCTTTGGGCAGTTATTCGGTGCGTTTAAGGAACTTAAAAAACCGATGTGGATGCTGATGGCGGTTACGGCTTTGAACTGGATTGCGTGGTTCCCTTTTTTCTTGTTCGACACTGATTGGATGGGTCGTGAGGTGTACGGTGGTAAGGTGGGGGAGAGAGCATACGATGCGGGTGTGCGCGCGGGTGCATTGGGGCTCATGCTTAATTCGGTTGTTTTGGGTTTGGTGTCGTTGGTACTTGAACCGTTGGGTCGTTTGGTTGGGGGAGTTAAGAGGCTTTGGGGGATGGTTAACTTGGTTCTCGCTGTTTGTTTGGCAATGACGGTCCTTATTACTAAGGCTGCTGAACACGAAAGGCATGTAAGCGGTGCCGCTGCCGTGGGGGCACCATCCCACGGTGTCAAAGCTGCGGCGTTGATTTTCTTCTCCGCTCTCGGGATCCCTCTTGCGATTACTTACAGCGTCCCTTTCGCTCTAGCCTCGATTTATTCCAGCACTTCAGGGGCAGGCCAAGGTTTATCTCTTGGACTTCTCAATATTTCAATTGTGGTACCACAGATGCTGGTGTCGGCAATAAGTGGACCATGGGATGCTTTATTTGGCGGTGGCAACTTACCGGCATTCGTGGTAGGTGCTGTGGCGGCTGCCGTTAGTGCCATATTGGCAATTGTCTTGCTGCCTACTCCAAAGCCCGCTGATGTGGCCAAGGCTTCAGCCACCACTCAAGGGGGTTTCCATTAA 1548 0.5388 MENLSPKKNNIDTNSSSLNVEEAAQPEPSPLRKMIAVASIAAGIQFGWALQLSLLTPYVQLLGVPHKWAAFIWLCGPISGLLVQPIVGYCSDRCTSRFGRRRPFILSGALAVAIAVFLIGYAADLGHSFGDDLTKKTRPRAVAIFVTGFWILDVANNMLQGPCRAFLGDLAAGDHRKTRTANAFFSFFMAIGNVLGYAAGSYSHLHKIFPFTETKACDVFCANLKSCFFFSIFLLLVLTIIVLTYVKDRPIIKTSGGGNDNENEESAISCFGQLFGAFKELKKPMWMLMAVTALNWIAWFPFFLFDTDWMGREVYGGKVGERAYDAGVRAGALGLMLNSVVLGLVSLVLEPLGRLVGGVKRLWGMVNLVLAVCLAMTVLITKAAEHERHVSGAAAVGAPSHGVKAAALIFFSALGIPLAITYSVPFALASIYSSTSGAGQGLSLGLLNISIVVPQMLVSAISGPWDALFGGGNLPAFVVGAVAAAVSAILAIVLLPTPKPADVAKASATTQGGFH 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3130g00001 515 SUPERFAMILY MFS general substrate transporter 32 500 IPR036259 -
Gabi3130g00001 515 FunFam Sucrose transport protein 28 495 - -
Gabi3130g00001 515 Gene3D MFS general substrate transporter like domains 27 498 IPR036259 -
Gabi3130g00001 515 MobiDBLite consensus disorder prediction 1 23 - -
Gabi3130g00001 515 Pfam MFS/sugar transport protein 37 298 - -
Gabi3130g00001 515 NCBIfam sucrose/proton symporter 30 499 IPR005989 GO:0005886|GO:0008515|GO:0015770
Gabi3130g00001 515 MobiDBLite consensus disorder prediction 1 25 - -
Gabi3130g00001 515 PANTHER SUGAR TRANSPORTER 31 494 - -
Gabi3130g00001 515 CDD MFS_SLC45_SUC 34 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3130g00001 Gabi-Chr3130 12138 14947 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3130g00001 13 515 Sucrose Transporter Gene Family AT1G71890 64.510 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3130g00001 K15378 - gmx:100785359 730.324