Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3129g00026 ATGGGGAGAGCCACAAGGTGGTTGAAGAACTTGTTTGGTACAAAAAGAGACAGAGAACACAAACAAAATTCAAACTCTGGAGACCCCAAATGGCTTCCTCCTCCTCCTTCTTCTTCTGCTCCTCATTCTGAGAGTAATTCCAAAGTTTTATGTCACAATCCAACAACTATTCCACCTAACATTTCTCCAGCAGAAGCTTCTTGGTTACAATCTTTCCACACAGAAACAGAGAAGGAACAGAACAAGCATGCTATTGCTGTTGCCGCCGCCACCGCAGCAGCGGCTGATGCCGCCGTGGCTGCTGCACATGCTGCGGTGGCTGTGGTTAGGCTCACCAGCCGTGGCAGAAGCACCACCATGTTTGGTGGTGGACATGAGATGTGTGCTGCTACTATCAAGATTCAAACAGTATTTAGAGGATACCTTGCAAGAAAGGCACTGAGAGCCTTAAAAGGATTGGTTAAGTTACAGGCACTTGTCAGAGGGTATTTAGTGAGGAAGCAAGCAACAGCAACACTGCATAGTATGCAGGCTCTTATTAGAGCTCAAGCTACAGTTCGGTCTCAGAAATCTCGCAGGTTCATGAGCACAAAGAATGAACCTTACAGATTCCAAAACCAAGCAAGAAGATCCATGGAGAGATTTGATGACACTAGGAGTGAGTACACAGCTCCAATACACAGTAGAAGGCTCTCATCTTCTTTTGATGGCACAATTAACTACAACAACAATGGTGTTTATGAAAGCCCCAAAATAGTGGAAGTGGACACTGGAAGGCCTAAGTCAAGGTCTCGCAGGACCAACACCTCAATATCAGATTTTGGTGATGACCCATCATTTCAGACACTTTCTTCTGCTCTTCCAATTCCATGTAGGAACCCATCTCGTTTATCCACACCAGACCAAAGGAATTTGCATGAGTTTGATTGGGGGTTAACAGGTGAAGAATGCAGATTCTCTACAGCACAAAGCACTCCACGTTGTAGTTGTGGGTCAGTTGCACCTATGACACCAAAGAGTGTATGCACTGAAAATATATTCCTCAGGCAATATGGGAATTTTCCAAATTACATGGCTAGCACTCAGTCTTTCAAGGCTAAATTGAGGTCTCATAGTGCTCCAAAGCAACGGCCAGAACCAGGTCCAAAGAGGAGGCTTTCCCTCAATGAAATGTTGGAGTCTAGGAATAGTTTGAGTGGGGTTAGAATGCAAAGGTCTTGCTCACAGGTTCAAGAAGCCATTAGTTTCAAGAATGCTGTGATGGGTAAGCTTCACAAGTCCACAGAATCTGCTAGGGAGACAGATAGAAAGTGCTTCCACCAGAGAGGGTGGTGA 1335 0.4524 MGRATRWLKNLFGTKRDREHKQNSNSGDPKWLPPPPSSSAPHSESNSKVLCHNPTTIPPNISPAEASWLQSFHTETEKEQNKHAIAVAAATAAAADAAVAAAHAAVAVVRLTSRGRSTTMFGGGHEMCAATIKIQTVFRGYLARKALRALKGLVKLQALVRGYLVRKQATATLHSMQALIRAQATVRSQKSRRFMSTKNEPYRFQNQARRSMERFDDTRSEYTAPIHSRRLSSSFDGTINYNNNGVYESPKIVEVDTGRPKSRSRRTNTSISDFGDDPSFQTLSSALPIPCRNPSRLSTPDQRNLHEFDWGLTGEECRFSTAQSTPRCSCGSVAPMTPKSVCTENIFLRQYGNFPNYMASTQSFKAKLRSHSAPKQRPEPGPKRRLSLNEMLESRNSLSGVRMQRSCSQVQEAISFKNAVMGKLHKSTESARETDRKCFHQRGW 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3129g00026 444 MobiDBLite consensus disorder prediction 41 56 - -
Gabi3129g00026 444 SMART iq_5 149 170 IPR000048 GO:0005515
Gabi3129g00026 444 SMART iq_5 126 148 IPR000048 GO:0005515
Gabi3129g00026 444 ProSiteProfiles IQ motif profile. 151 178 IPR000048 GO:0005515
Gabi3129g00026 444 PANTHER IQ-DOMAIN 5-RELATED 1 393 - -
Gabi3129g00026 444 Pfam Protein of unknown function (DUF4005) 325 401 IPR025064 -
Gabi3129g00026 444 Gene3D - 126 169 - -
Gabi3129g00026 444 MobiDBLite consensus disorder prediction 254 277 - -
Gabi3129g00026 444 ProSiteProfiles IQ motif profile. 127 155 IPR000048 GO:0005515
Gabi3129g00026 444 MobiDBLite consensus disorder prediction 1 56 - -
Gabi3129g00026 444 MobiDBLite consensus disorder prediction 10 25 - -
Gabi3129g00026 444 Pfam IQ calmodulin-binding motif 154 168 IPR000048 GO:0005515
Gabi3129g00026 444 Pfam IQ calmodulin-binding motif 130 148 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3129g00026 Gabi-Chr3129 354380 356237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3129g00026 1 403 IQD Protein Family AT3G16490 51.449 3.51e-96 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3129g00026 - - gmx:100797909 563.918