Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3129g00010 ATGGACAAGAGCTGGATTTTGGCTTTTCTCCTCCTCATACTCCATTTAAGAAGAACAAGAGCTGCCTTTGGTGTTGGCGGTGGTATTGGTGTTGGTGTTGGCGGTGGTGGAGTGGTTTGGGTTGGTGGAGGGATTAACAGCCCGGAGTCCCCGGGATCTTCAGTGCCAAAGCTGGATGGAGCTTACACAGCTCTACAGGCATGGAAATCTGCAATTACTGATGACCCAGTAAAGATTTTAGATAGTTGGGTTGGTTCTAATGTGTGTTCTTACAAAGGAGTCTTCTGTGATAATCGTCAAGATGGAATGGCTGCATCAGCTGTCCCTGTAGTTGCAGGCATTGATCTCAACCATGCCAATCTCCAAGGAACTCTTGTCAAAGAGCTCTCCTTACTCACTGATATGTCTTTACTCCACCTCAACAGTAATAGGTTTACTGGCACTGTTCCTGACACATTCAGAGACCTCTTGTCTCTGGAAGAGTTAGACCTCAGCAACAACCAACTTTCAGGTCCTTTCCCAGCTGTTACTTTGTACATGCCAAGCCTCATCTACTTGGATATCAGATTCAACTACTTCTCAGGGCCACTTCCTCAAGAACTCTTCAATAAGAATCTGGATGCAGTATTTCTCAACAACAATCAATTTGAAGGTGAAATTCCACAAAATTTGGGTAGTTCCCCTGCCTCTGTGATAAATTTAGCCAACAACAAGTTGAGTGGAAACATCCCAGCAAGTTTTGGCTTCATGGGTTCTAAAATAAAGGAGATTTTGTTCCTCAATAACCAGCTAACTGGATGCATTCCTGAAGGAGTGGGGCTCTTCACAGAGATGCAAGTTCTGGATGTGAGCTACAATGCACTGATGGGTCATTTGCCAGACACATTATCTTGCCTGCAAAATATAGAAGTTCTCAATTTGGCACACAACAAACTTTCTGGGGAGTTATCAGATATAATCTGCTCTCTAAGAAGCCTTGCAAATCTAACCGTTGCTTACAATTTCTTTTCTGGGTTCAGCCAGCAATGCTCAAGGCTTTTCTTTAGGAATGTAGGTTTTGATTTCTCACTTAACTGCATTCCTGGAAGAGACATGCAGAAACCTCAACCTGAGTGCTCTGTGATCCCAGGCGGTAGCCTAAGTTGTCTCAGAATCCCTACACCAAAGCCTCTTGTTTGTGGTTCAGTGGCTGTAAGTACCTCCTCCAAGCACACTGATCCCAGTTCACCATCTCCTTGA 1239 0.4439 MDKSWILAFLLLILHLRRTRAAFGVGGGIGVGVGGGGVVWVGGGINSPESPGSSVPKLDGAYTALQAWKSAITDDPVKILDSWVGSNVCSYKGVFCDNRQDGMAASAVPVVAGIDLNHANLQGTLVKELSLLTDMSLLHLNSNRFTGTVPDTFRDLLSLEELDLSNNQLSGPFPAVTLYMPSLIYLDIRFNYFSGPLPQELFNKNLDAVFLNNNQFEGEIPQNLGSSPASVINLANNKLSGNIPASFGFMGSKIKEILFLNNQLTGCIPEGVGLFTEMQVLDVSYNALMGHLPDTLSCLQNIEVLNLAHNKLSGELSDIICSLRSLANLTVAYNFFSGFSQQCSRLFFRNVGFDFSLNCIPGRDMQKPQPECSVIPGGSLSCLRIPTPKPLVCGSVAVSTSSKHTDPSSPSP 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3129g00010 412 FunFam Leucine-rich repeat receptor protein kinase EMS1 243 342 - -
Gabi3129g00010 412 FunFam Leucine-rich repeat extensin-like protein 1 62 226 - -
Gabi3129g00010 412 PRINTS Leucine-rich repeat signature 159 172 - -
Gabi3129g00010 412 PRINTS Leucine-rich repeat signature 299 312 - -
Gabi3129g00010 412 Pfam Leucine rich repeat 137 192 IPR001611 GO:0005515
Gabi3129g00010 412 Gene3D Ribonuclease Inhibitor 228 350 IPR032675 -
Gabi3129g00010 412 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 50 399 - -
Gabi3129g00010 412 Gene3D Ribonuclease Inhibitor 61 227 IPR032675 -
Gabi3129g00010 412 Pfam Leucine rich repeat N-terminal domain 62 97 IPR013210 -
Gabi3129g00010 412 SUPERFAMILY L domain-like 62 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3129g00010 Gabi-Chr3129 186136 187527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3129g00010 56 384 Leucine-rich Repeat extension Gene Families AT3G24480 49.552 9.46e-106 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3129g00010 - - gsj:114407518 678.707