Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3129g00009 ATGAACTCTGTAAGTAGTTCTGATCTCATAGATGCAAAGCTTGAAGAGCATCAGTTGTGTGGATCCAAGCAGTGCCCTGGTTGCGGACACAAGTTTGAAGGGAAACCGGACTGGCTAGGTCTTCCTGCTGGAGTGAAGTTTGATCCAACGGACCAAGAACTAATAGAACATCTTGAAGCCAAAGTGGAAGCAAAGAACATGAAATCACACCCTTTGATAGATGAGTTCATTCCTACTATTGAAGGAGAAGATGGGATTTGTTATACCCATCCTGAGAAACTTCCAGGAGTAACAAGAGATGGCTTGAGCAGACACTTTTTCCATAGACCTTCAAAGGCTTATACAACCGGGACAAGAAAGAGAAGAAAGATTCAAAACGAATGTGACTTACAAGGTGGAGAAACTCGATGGCACAAGACAGGTAAGACTAGGCCAGTGATGGTTAATGGAAAACAAAAGGGTTGCAAGAAAATTCTAGTTCTCTATACCAACTTTGGGAAGAACAGAAAACCTGAGAAAACCAACTGGGTGATGCACCAATATCATTTGGGACAACATGAAGAAGAGAAAGAAGGAGAGCTTGTAGTATCAAAGATATTCTATCAGACACAGCCAAGGCAATGCAATTGGTCAGATAGAAGTGCAACAACTGGTGAAGGAAGTGGTGAACCTAGTAGTAATAATAATAACAACAACAATAGCAGAAGGGACAGTGGAAGTGGGAGTTGTTCTTCAAAGGAAATAGTTACTCACAGAGATGAAATGTCTGCTGTTGTTGGTGTACCTCCAATAACAAGCTTCACTCATGCTTTGGATATTCAACAGCTGAAATCTGACCATTTTAGCTTCATACCATTCAGGAAAAGCTTTGATGAGGTTGGAATAGGAGAGGCTTCCACAGCAAGAGAAGTGGTGCAAGCATCAGGCTCATGTGAAGAAATACATGAACGGCATCATCCAACACAACATGTGGCTTCTCATCATCAACAACAACAGCAGCATCACCATGCTCACCATCAGATTGCAACATCAGCCTTTCATATTAGTAGGCCTTCACATCCCATCTCTACCATTATATCTCCACCACCCCTCCACCACACATCTGTCATCCTTGACGACAACTCTTACCATGTCTCAAGAATTATGCTCCAAAATGAAAATTTCCAGCAACAACATCATAAACTAGGTGGAAGGTCTGCGTCTGGTTTAGAGGAACTCATCATGGGGTGCACTTCAACTGATATCAAAGAGGAGTCATCCATCACAAACCCACAAGAAGCTGAATGGTTGAAGTACTCTTCTTATTGGCCAGACCCTGACAACCCGGATCATCATGGGTAA 1341 0.4251 MNSVSSSDLIDAKLEEHQLCGSKQCPGCGHKFEGKPDWLGLPAGVKFDPTDQELIEHLEAKVEAKNMKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQNECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSDRSATTGEGSGEPSSNNNNNNNSRRDSGSGSCSSKEIVTHRDEMSAVVGVPPITSFTHALDIQQLKSDHFSFIPFRKSFDEVGIGEASTAREVVQASGSCEEIHERHHPTQHVASHHQQQQQHHHAHHQIATSAFHISRPSHPISTIISPPPLHHTSVILDDNSYHVSRIMLQNENFQQQHHKLGGRSASGLEELIMGCTSTDIKEESSITNPQEAEWLKYSSYWPDPDNPDHHG 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3129g00009 446 MobiDBLite consensus disorder prediction 209 248 - -
Gabi3129g00009 446 FunFam NAC domain-containing protein 73 50 206 - -
Gabi3129g00009 446 ProSiteProfiles NAC domain profile. 41 202 IPR003441 GO:0003677|GO:0006355
Gabi3129g00009 446 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 6 334 IPR044799 GO:0003700
Gabi3129g00009 446 MobiDBLite consensus disorder prediction 209 246 - -
Gabi3129g00009 446 Gene3D NAC domain 50 206 IPR036093 GO:0003677|GO:0006355
Gabi3129g00009 446 SUPERFAMILY NAC domain 37 202 IPR036093 GO:0003677|GO:0006355
Gabi3129g00009 446 Pfam No apical meristem (NAM) protein 42 183 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3129g00009 Gabi-Chr3129 171864 176894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3129g00009 5 443 NAC Transcription Factor Family AT5G56620 54.292 1.57e-141 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi3129g00009 NAM 2.9e-24 No_clan