Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3126g00015 ATGAGTGAGAACTTGAAACAAGACTACGTCGTTTCAGCAGAGATCGGCCGGGGAAGATTCGGCACAGTTTCCCGGTGCTTCTCTGTTGACTCTGGCGGGTCTTTTGCCGTTAAATCCATCGACAAAGTGGTCATAACCGCCGGCGGTGACCCCCTCGATGCGCAATGCCTGTTAACGGAGCCCAGGATCCTTCAGCTTCTGTCCCCTCACCCTCACATCGTGAATCTCCATGGCCTCTACGAAGACGACACGCACCTCCACATGGTCCTCGACCTCTGCTACGAATCGGACCTCCACCGCGGGGTCATGCCCGAGCCCGAGGCTGCCGCTGTTATGTACCAGCTCATGCAAGCCGTGGCTCACTGTAACCGGCTCGGCGTGGCTCACCGTGACATAAAACCCGACAACATTCTTTTCGATGACAATAATCGGCTCAAGCTAGCCGACCTCGGCTCGGCTGAGATTTTCAAGGAGGACGAGCCGATGAGTGGGGTGGTGGGGACGCCGCATTACGTGGCGCCGGAGGTCCTCGCCGGAAGGGACTACACCGAGAAGATCGACGTGTGGAGCGCCGGTGTCGTTTTGTATGTAATGTTGGCCGGGTTTCCGCCGTTTCGGGGCGATTCCCCGGTGGAGATTTTTGAGGCTGTGCTTCGAGCCAACTTGAGGTTTCCGAGCCGAGTTTTTTCCTCCGTGTCATCGGTGGCAAAGGATCTGCTTCGTAGAATGCTGTGTAAAGACGTTTCTAGAAGGTTATCAGCAGAACAAGTTCTGAGGCACCCGTGGTTTAGCATTGCTGAACAGAACATAGCGACAGTGTGA 822 0.5584 MSENLKQDYVVSAEIGRGRFGTVSRCFSVDSGGSFAVKSIDKVVITAGGDPLDAQCLLTEPRILQLLSPHPHIVNLHGLYEDDTHLHMVLDLCYESDLHRGVMPEPEAAAVMYQLMQAVAHCNRLGVAHRDIKPDNILFDDNNRLKLADLGSAEIFKEDEPMSGVVGTPHYVAPEVLAGRDYTEKIDVWSAGVVLYVMLAGFPPFRGDSPVEIFEAVLRANLRFPSRVFSSVSSVAKDLLRRMLCKDVSRRLSAEQVLRHPWFSIAEQNIATV 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3126g00015 273 ProSiteProfiles Protein kinase domain profile. 9 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3126g00015 273 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Gabi3126g00015 273 FunFam Maternal embryonic leucine zipper kinase 2 271 - -
Gabi3126g00015 273 PIRSF ILK 2 260 - -
Gabi3126g00015 273 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 266 - -
Gabi3126g00015 273 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Gabi3126g00015 273 Pfam Protein kinase domain 9 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3126g00015 273 SMART serkin_6 9 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3126g00015 273 SUPERFAMILY Protein kinase-like (PK-like) 5 264 IPR011009 -
Gabi3126g00015 273 Gene3D Transferase(Phosphotransferase) domain 1 93 272 - -
Gabi3126g00015 273 CDD STKc_CAMK 8 262 - -
Gabi3126g00015 273 Gene3D Phosphorylase Kinase; domain 1 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3126g00015 Gabi-Chr3126 201210 202209 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3126g00015 3 263 EF-hand Containing Proteins AT1G50700 40.520 1.34e-65 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gabi3126g00015 Pkinase 1.4e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3126g00015 K08794 - gmx:547731 449.129