Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3126g00003 ATGGTTCTATTAGATGAGAAGGGTGGAAGGATACATGCTACTGTCAAAGGATCTCTGAATGTCCGTAAAAATTTTTGTGAAGGGGATGTCTATTTTATAAGCAATTGTGGAGTTGGGTTGAATAATGATAATTTCAAGCCAACTAAACATGATTATCGTCTGTCTTTCAACTTGAGGACCGATGTTAAATCGACTGTGTATGCTACTATTCCTACTAATGGATTTAGTTTTGTTGATTTTGACGTTATAGAGAGAGAATCAGCTGACTCTTCTTATTTAGTGGGCAATGTTTTTGTCTCTGAGTTTATTGACGTCATCGGTTTGCTGTCAGGTATTGGGGATGTTCATGAGCATGTTGTATCCGGTAGAAAAACAAAGATGGTTTTTTTAGAACTTGATGACATCAGGGGTCACAAGCTCGAACGTACTTTGTGGGAGCAACATGTGGATAAAGTGCAGTATTTCTTGGCAAAGAACGAGTCTCCTCAAAATGTTGCAATCGTCCAGCTTGCAAGGATTAAGGGTTTCAGGGGTCACAAGCTTGAGTCATTTTATGAGAACAATATGTGGATGAAGTGCGAACGTTTTTGGCAAACAAACAGTCTTCTCAGAACATCATAA 621 0.3865 MVLLDEKGGRIHATVKGSLNVRKNFCEGDVYFISNCGVGLNNDNFKPTKHDYRLSFNLRTDVKSTVYATIPTNGFSFVDFDVIERESADSSYLVGNVFVSEFIDVIGLLSGIGDVHEHVVSGRKTKMVFLELDDIRGHKLERTLWEQHVDKVQYFLAKNESPQNVAIVQLARIKGFRGHKLESFYENNMWMKCERFWQTNSLLRTS 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3126g00003 206 SUPERFAMILY Nucleic acid-binding proteins 98 190 IPR012340 -
Gabi3126g00003 206 Gene3D - 69 202 IPR012340 -
Gabi3126g00003 206 Gene3D - 1 66 IPR012340 -
Gabi3126g00003 206 Pfam Domain of unknown function DUF223 1 93 IPR003871 -
Gabi3126g00003 206 CDD RPA1_DBD_A_like 1 62 - -
Gabi3126g00003 206 SUPERFAMILY Nucleic acid-binding proteins 1 63 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3126g00003 Gabi-Chr3126 79105 79952 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3126g00003 3 113 Core DNA Replication Machinery Family AT5G08020 28.696 3.92e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3126g00003 - - tpra:123922621 113.62