Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3120g00030 ATGGAACCTTTGGACGATGAGCAAGTCCTCGAATCCGACTTCGCTTCCATTAGTTCTGGTTCAGGCATTTCTTCAATATTCAGCACTGAGGATTTCCGGAACATCAACAGCTCCGGCGACAATTCCTCTATCAGCAGCGGCTCCGGCGAGATTCTGGCCCTCGCAGTGAACGAGGCGATTCTTTCTCCTCCGTTGCTTTACCGCTCTTTGCCGGCTGAGTTTGCGGAAGTGGCGGTGAGAGAGAAGTGCGTCGGAAGGAATAACAAGGGAGTGAGTTGGGGACACACTTCGGTGATTGGGAGGCGGAGAGAAAACGAAGACGCCGTTGCCGTTATTCCAGGATTCATGTCACAGACATGCGATCACGTCGGCGGTTGTACGGCTCCCGGCTCCAGATCTTCCGTCGAGATCTCCCCCGTTCATTACTTCGGCGTTTACGACGGCCACGGTGGCTCTCAGGTGGCTAAATTTTGTGCCAAGAGGATGCACGATGTTATAGCAGAGGAGTGGGACCGAGAAATCGCAGGTGGCGCTGAATGGCGGAGAAGGTGGGAAGCTGTGCTTGCTAATGGCTTTGAGAGGACTGACAATGAAATCCTATCAGACGCAGTTGCACCAGAAATGGTAGGATCTACTGCCTCTCTGGTGGTTCTATCTGGTTGCCAAATTATTACATCCAACTGCGGCGACTCGAGGGTAGTTCTTTGCCGAAGGACTGAAACAATCCCCTTGACAGTGGATCAGAAGCCAGATAGACAAGATGAACTCTTGAGAATTGAAGGAGGAGGAGGAAGAGTCATAAACTGGAATGGAGCTAGGGTGTTTGGTGTTCTTGCCATGTCCAGGGCTATAGGTGATCGGTACTTGAGGCCTTGGATTATTCCTGTGCCGGAGATAACTTTTACAGCAAGAACCGACGAGGATGAATGCTTAATTTTGGCAAGTGATGGACTTTGGGATGTAATGACCAATGAAGAGGTTGGAGAAGTAGCGCGCCATATGCTTAGAAGGCGCCGCAGATCCTTGTCAATGGAGGAAATATCTCCTGCACAAGTTGTTGCGGATAGCCTGACTGAAATTGCGTATGGTAGAAACAGTAAAGATAACATTTCGATCATAGTTGTTGATCTGAGATCAAAGAGAAAACGTCAGCAAAGGTCTCCTTTAATTTCCTAA 1176 0.4949 MEPLDDEQVLESDFASISSGSGISSIFSTEDFRNINSSGDNSSISSGSGEILALAVNEAILSPPLLYRSLPAEFAEVAVREKCVGRNNKGVSWGHTSVIGRRRENEDAVAVIPGFMSQTCDHVGGCTAPGSRSSVEISPVHYFGVYDGHGGSQVAKFCAKRMHDVIAEEWDREIAGGAEWRRRWEAVLANGFERTDNEILSDAVAPEMVGSTASLVVLSGCQIITSNCGDSRVVLCRRTETIPLTVDQKPDRQDELLRIEGGGGRVINWNGARVFGVLAMSRAIGDRYLRPWIIPVPEITFTARTDEDECLILASDGLWDVMTNEEVGEVARHMLRRRRRSLSMEEISPAQVVADSLTEIAYGRNSKDNISIIVVDLRSKRKRQQRSPLIS 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3120g00030 391 Gene3D - 79 387 IPR036457 -
Gabi3120g00030 391 FunFam Protein phosphatase 2C 51 85 385 - -
Gabi3120g00030 391 ProSiteProfiles PPM-type phosphatase domain profile. 92 377 IPR001932 -
Gabi3120g00030 391 Pfam Protein phosphatase 2C 132 370 IPR001932 -
Gabi3120g00030 391 ProSitePatterns PPM-type phosphatase domain signature. 142 150 IPR000222 GO:0043169
Gabi3120g00030 391 PANTHER PROTEIN PHOSPHATASE 75 377 IPR015655 GO:0004722|GO:0006470
Gabi3120g00030 391 SMART PP2C_4 81 375 IPR001932 -
Gabi3120g00030 391 CDD PP2Cc 94 377 IPR001932 -
Gabi3120g00030 391 SUPERFAMILY PP2C-like 85 378 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3120g00030 Gabi-Chr3120 327049 343614 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3120g00030 93 389 PP2C-type Phosphatase Gene Family AT4G26080 49.841 5.86e-96 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3120g00030 K14497 - gmx:100793293 617.461