Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3111g00041 ATGGACAACATATGGATTGTGTTTGTGACAACATTTCTCTTGTTCACTGTGATCATGGTCGTGTACAGGAACAGAAGGATTAGACTCAAACCGAAACACATAAATAAACTTCCATTAGGCACTCTTGGATGGCCTTTTATCGGTGAAACCATTGAGTTTGTTTCTTGTGCTTACTCTGATCGTCCTGAGAGCTTCATGGACAAGCGATGCCGCATGTATGGCAAGGTGTTTAAGTCACACATATTTGGAAGCCCCACTATTGTTTCCACAGATGCAGATGTTAATAAATTCATATTGCAAAGTGATGCAAAGGTTTTTGTTCCTTCTTATCCCAAGTCTCTGACTGAGTTGATGGGGGAGTCTTCTATTTTGCTCATCAATGGAAGCCTACAGAAGAGAATACATGGACTTATTGGAGCTTTCTTCAAGTCTCAACAGCTTAAGGCTCAGATCACAAGGGACATGCAGAAGTATGTACAAGAATCAATGGCAAATTGGAGGGAGGACCACCTCATATACGTTCAAGATGAAACCAAAAATATTGCCTTTCAAGTACTAGTCAAGGCATTGATTAGTTTGGATCCAGGTGAAGAAATGGAGCTTCTGAAGAAACAATTTCAGGAATTCATCTCTGGTCTCATGTCTTTACCTATTAAACTGCCAGGAACTAAACTTTATCAATCTTTACAGGCAAAAAAGAAAATGGTCAAATTAGTGCAGAAAACTATTCAAACTAAAAGAAATAGTGGCATCTCCAAAGTTCCTAAAGATGCAGTGGATGTGCTTCTGAATGATGCAAATGAGCAATTAACTGATGATTTAATAGCAGATAATATGATCGATATGATGATTCCAGGAGAAGACTCGGTGCCAGTTCTTATGACTCTAGCTATAAAGTATCTATCAGAATGCCCTGCTGCTTTGCAACAATTGATGGAGGAAAATGTGAAGCTTAAGAAGCTCAAAGATCAGCTTGGGGAGTCTTTGTGCTGGAGTGATTACTTATCATTGCCATATACTCAAATGGTTATCACAGAAACTTTGAGGATGGGAAATATAATAATTGGTGTTATGCGAAAGGCCATGAAAGATGTTGAAATAAAAGGGTATTTAATACCAAAAGGGTGGTGTGTTTTTGCATATTTTAGATCAGTTCATCTAGATAACAAAAACTTTGACTGGCCTTACCAATTCAATCCATGGAGGTGGCAAGACAAAGACATGAGCAGTTTCAATTTCACTCCGTTTGGAGGGGGACAAAGGCTGTGCCCTGGCCTTGACTTGGCCAGGCTGGAGGCTTCTATATTCCTACACCACTTCGTTACTCAATTCAGGTGGCAAGCTGAAGAAGATACAATTGTGAACTTCCCCACTGTAAGAATGAAAAGGAGGATGCCAATCTTAGTGAGGAGAAGAAGTAACGTGGAAGGAGGTGAAATTATCTGTGGTCAGCTTGAAGATATCTCCATCATGGATTATGCCATTGGTCTCCATCTCGTCACCCTCAGAACCCGTCGAACCCGGGCTCTGATACAACTGTTGGAACTCGGTTCCCTCAACTCGACTAAGAAGCCTTTTGCCAAAGTCAGTCAACAAGATCTGGATCTCGGAAATATTACCTCGGCCTGA 1629 0.407 MDNIWIVFVTTFLLFTVIMVVYRNRRIRLKPKHINKLPLGTLGWPFIGETIEFVSCAYSDRPESFMDKRCRMYGKVFKSHIFGSPTIVSTDADVNKFILQSDAKVFVPSYPKSLTELMGESSILLINGSLQKRIHGLIGAFFKSQQLKAQITRDMQKYVQESMANWREDHLIYVQDETKNIAFQVLVKALISLDPGEEMELLKKQFQEFISGLMSLPIKLPGTKLYQSLQAKKKMVKLVQKTIQTKRNSGISKVPKDAVDVLLNDANEQLTDDLIADNMIDMMIPGEDSVPVLMTLAIKYLSECPAALQQLMEENVKLKKLKDQLGESLCWSDYLSLPYTQMVITETLRMGNIIIGVMRKAMKDVEIKGYLIPKGWCVFAYFRSVHLDNKNFDWPYQFNPWRWQDKDMSSFNFTPFGGGQRLCPGLDLARLEASIFLHHFVTQFRWQAEEDTIVNFPTVRMKRRMPILVRRRSNVEGGEIICGQLEDISIMDYAIGLHLVTLRTRRTRALIQLLELGSLNSTKKPFAKVSQQDLDLGNITSA 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3111g00041 542 CDD CYP90-like 69 471 - -
Gabi3111g00041 542 Coils Coil 308 328 - -
Gabi3111g00041 542 PANTHER CYTOCHROME P450 26 36 453 - -
Gabi3111g00041 542 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 416 425 IPR017972 GO:0005506|GO:0016705
Gabi3111g00041 542 SUPERFAMILY Cytochrome P450 35 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3111g00041 542 Pfam Cytochrome P450 38 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3111g00041 542 Gene3D Cytochrome P450 29 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3111g00041 542 PRINTS E-class P450 group I signature 413 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3111g00041 542 PRINTS E-class P450 group I signature 381 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3111g00041 542 PRINTS E-class P450 group I signature 423 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3111g00041 542 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3111g00041 542 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 28 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3111g00041 Gabi-Chr3111 397614 408590 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3111g00041 33 445 Cytochrome P450 AT3G13730 67.464 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3111g00041 K12638 - gmx:100797868 820.846