Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3111g00024 ATGGCAGCCAACGAAGAAGAAGTACCCAAAAGGGTCCAATACCCATTGGACTCTTGCTCCTACAAGTTACTCGACAAGATAGGTACTGGTGTCAGTGCCATTGTCTACAAAGCAATCTGTGTGCCAATGAACTCTTCACTTGTAGCAATCAAATCCATAGACCTTGATCGTTCACGCCCTGACTTGGACGATGTTCGACGCGAAGCAAAGACCTTATCTCTTCTTTCTCACCCAAACATCCTCAAATCTCACTGTAGCTTCACTGTGGATCGTCGTCTTTGGGTGGTGATGCCATTCATGGCTGGTGGTTCTTTGCAATCCATCATTTCTCACTCTTTCCCAGATGGCTTACCCGAACCATGCATAGCTGTGGTTCTCAAAGAGACTCTGAATGCTCTCTCTTACCTCCATGGTCAAGGACATCTTCACAGGGACATAAAAGCAGGAAATATCCTAGTGGACTCAAATGGATTGGTGAAGCTTGCAGATTTTGGTGTCTCTGCTTCCATTTATGAGTCTTTGAGTTCATCGTCTGGTGCAGCATGTTCTTCATCTTCTTCTTCTCTTATGCTTACTGGTGTTGCTGGCACACCATATTGGATGGCTCCTGAGGTCATTCACTCACACACAGGCTACAGTTTCAAGGCTGATATATGGTCATTGGGGATAACTGCTTTGGAGTTAGCACATGGAAGGCCTCCTCTCTCTCATCTTCCTCCTTCTAAGTCTATGATACTCAAGATCACCAAGCGGTTTCGGTTTTCAGATTTTGACAAATATAGGAAGGACCATGGTGGCAAGAAGTTCTCCAAGGCCTTCAAGGACATGGTGGCTTCTTGCCTTGACCAAGACCCTTCAAGGAGACCCACTGCTGAGAAACTTCTCAAGCATCCCTTCTTCAAAAACTGCAAGGGCTCTGAGTTTCTAGTGAAGAATGTGCTGCAAGGGTTGCCTAGTGTTGAGAAAAGGTATAAAGAGAGCAAGATTCTGCAGCATTCAACGAGTAACGAGGAGGAGGATGAAGAGGATGATGAGCAGCAAAATATGAAGCAGAGAAGGATCAGTGGTTGGAACTTCAATGAAGATGGGTTGGAACTCGACCCTGTATTCCCGAACGATCAGACCAACTACGATGATTCTATTGTTAAAGAAGTCAGGTTTGGAGGTGAAACTGTTATCCAAGACACGGGTGTTCAGATGGGTGAATCAGAAGAGCATGGTGTTGCTGCATCAAGAACCACGAGGGAGCCAAACCCGAGTGCTGTTAATGTTGATGAGGTTGACACCTTAGTGGGTATTCATGGTTCTGCAGGAGTGGGAAAAGCTGGAAGTGTTGAGGTTGGAAACCGCGAAGCCATGTTGGCCACTCTGAATGTATTAAAAGGGAGCTTGGAACAAGAGCTTGGGCAAGTTAAGTTTCTGATGAATATGTTACAAAGAGAGGAGCCTCAAGTGGTTGATAGTGAGGAACAAATGATTTCAAGGCTGATGACTGAATTGGAAAACGAGAGGAAGAAGAACTTGCAGTTAGAGTTGCAGATTGAGGCCTTCAAGCTTCAGCTTTCTTCCGGTGTTAATTAA 1581 0.4535 MAANEEEVPKRVQYPLDSCSYKLLDKIGTGVSAIVYKAICVPMNSSLVAIKSIDLDRSRPDLDDVRREAKTLSLLSHPNILKSHCSFTVDRRLWVVMPFMAGGSLQSIISHSFPDGLPEPCIAVVLKETLNALSYLHGQGHLHRDIKAGNILVDSNGLVKLADFGVSASIYESLSSSSGAACSSSSSSLMLTGVAGTPYWMAPEVIHSHTGYSFKADIWSLGITALELAHGRPPLSHLPPSKSMILKITKRFRFSDFDKYRKDHGGKKFSKAFKDMVASCLDQDPSRRPTAEKLLKHPFFKNCKGSEFLVKNVLQGLPSVEKRYKESKILQHSTSNEEEDEEDDEQQNMKQRRISGWNFNEDGLELDPVFPNDQTNYDDSIVKEVRFGGETVIQDTGVQMGESEEHGVAASRTTREPNPSAVNVDEVDTLVGIHGSAGVGKAGSVEVGNREAMLATLNVLKGSLEQELGQVKFLMNMLQREEPQVVDSEEQMISRLMTELENERKKNLQLELQIEAFKLQLSSGVN 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3111g00024 526 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 13 379 IPR047173 GO:0043539
Gabi3111g00024 526 MobiDBLite consensus disorder prediction 401 420 - -
Gabi3111g00024 526 SUPERFAMILY Protein kinase-like (PK-like) 20 321 IPR011009 -
Gabi3111g00024 526 SMART serkin_6 21 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3111g00024 526 Gene3D Transferase(Phosphotransferase) domain 1 103 357 - -
Gabi3111g00024 526 MobiDBLite consensus disorder prediction 329 350 - -
Gabi3111g00024 526 FunFam Serine/threonine-protein kinase BLUS1 10 99 - -
Gabi3111g00024 526 Pfam Protein kinase domain 21 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3111g00024 526 ProSitePatterns Protein kinases ATP-binding region signature. 27 51 IPR017441 GO:0005524
Gabi3111g00024 526 Coils Coil 486 520 - -
Gabi3111g00024 526 ProSiteProfiles Protein kinase domain profile. 21 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3111g00024 526 FunFam Serine/threonine-protein kinase BLUS1 103 344 - -
Gabi3111g00024 526 Gene3D Phosphorylase Kinase; domain 1 10 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3111g00024 Gabi-Chr3111 256635 258913 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3111g00024 11 509 MAP Kinase Kinase Kinase Kinase AT4G14480 54.960 0.0 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Gabi3111g00024 Pkinase 2.7e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3111g00024 K08835 - gmx:100820227 677.167