Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3111g00009 ATGGGTGCTTCGGGAAGATGGTTTAAATCACTTTTTTCTCACAGAAAGACCTCAAGCTCAACAATTGATCAAGAGAAGGGTAGTGATAAAAAAAGCAAGAAGTGGAAGCTATGGAGGAACCATTCAGAAGTGTCGTCCATCTCCACCTCTTCCACCACGAAGAAGGGTGGTGCTGCTGTATCGGATTCTTCTTCGCTGAATTCTGCGGTGGCTGTGGTGGTCAGAGCTCCACCCAAAGATTTCATGGTCATCAAGCAGGAATGGGCTGCCATACGCATTCAGGCTGTGTTTCGAGCCTTCTTGGCTAGACGAGCTTTCAGGGCCTTGAGGGCAGTGGTAAGGCTGCAAGCTATATTTCGTGGCCGGCAAGTCAGAAAGCAAGCAGCTGTTACTCTAAAGTGCATGCAGGCTCTTGTTCGAGTGCAGGCACGTGTAAGGGCAAGGAATGTGAGAAAGTCTCCAGAAGGGAAAGCAGTGCAGAAATTATTAGATGAGTATCGTAACCAGGCTGATCCTGTTAAGCAGATTGAGCAAGGATGGTGTGACATTCCTGGAACTGTGGATGAAGTTAAAGCAAAGCTAAGAATGAGGCAAGAAGGAGCCATTAAGAGGGATAGAGCAATGGCATACTCTTTCTCCACACAGCAATCAAGACTGAGTGCTAGTCCAAACATGAAAGCCATTAAAGCAGTGACTCGTCTCAAGCATCACAGCCTAGACAATAAGAGCTTAGGATGTAGCTTGTTAGAACGCTGGATGGAGGCCAAGCCATGGGAGAGTCCAATGTCCAGAAAAAGCGAAGACCTTGTTCCTCCCTTTCAATCAAGAAGGAATGGTGTGACAACTAGGATTTCAGTTAAACCTCTTGCAGCATTTCAATCAACTCCATCATCTTCGGCCATAAGCTCTGAATGCATGTATGATGATAGCCCTGGATCAACATCATGTACATCTGAATCTCCATATCTGCCATCCGCCAATAATGTCATGGCAGCAGCAACAGAGGGAAGAGATGTTCATCAACCAAGCTACATGAATTTGACAGAATCAACTAAGGCTAAACTGAAAGCTAGCAGGTGTTCTTCACAGAATGCGAAGAGACTCGTAATGGAGGATTGCCTGTCTCATAGCACCACAACAGCATTTCTGAATGAAGATACTAGAAGCAGTTCTGGTTCTGATCCTTCAGTTAATTTATGGAAGGATCTTTGTGCAACACCTCTAAGGGCAAGTTATCAAAAACGATATGCTGGAAGATAA 1260 0.4532 MGASGRWFKSLFSHRKTSSSTIDQEKGSDKKSKKWKLWRNHSEVSSISTSSTTKKGGAAVSDSSSLNSAVAVVVRAPPKDFMVIKQEWAAIRIQAVFRAFLARRAFRALRAVVRLQAIFRGRQVRKQAAVTLKCMQALVRVQARVRARNVRKSPEGKAVQKLLDEYRNQADPVKQIEQGWCDIPGTVDEVKAKLRMRQEGAIKRDRAMAYSFSTQQSRLSASPNMKAIKAVTRLKHHSLDNKSLGCSLLERWMEAKPWESPMSRKSEDLVPPFQSRRNGVTTRISVKPLAAFQSTPSSSAISSECMYDDSPGSTSCTSESPYLPSANNVMAAATEGRDVHQPSYMNLTESTKAKLKASRCSSQNAKRLVMEDCLSHSTTTAFLNEDTRSSSGSDPSVNLWKDLCATPLRASYQKRYAGR 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3111g00009 419 MobiDBLite consensus disorder prediction 19 35 - -
Gabi3111g00009 419 Gene3D - 84 137 - -
Gabi3111g00009 419 ProSiteProfiles IQ motif profile. 110 137 IPR000048 GO:0005515
Gabi3111g00009 419 Pfam IQ calmodulin-binding motif 88 107 IPR000048 GO:0005515
Gabi3111g00009 419 Pfam IQ calmodulin-binding motif 110 127 IPR000048 GO:0005515
Gabi3111g00009 419 PANTHER IQ-DOMAIN 5-RELATED 1 393 - -
Gabi3111g00009 419 SMART iq_5 108 129 IPR000048 GO:0005515
Gabi3111g00009 419 SMART iq_5 85 107 IPR000048 GO:0005515
Gabi3111g00009 419 MobiDBLite consensus disorder prediction 14 35 - -
Gabi3111g00009 419 ProSiteProfiles IQ motif profile. 86 114 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3111g00009 Gabi-Chr3111 91692 93955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3111g00009 1 409 IQD Protein Family AT2G26180 44.471 1.47e-92 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3111g00009 - - gmx:100788715 535.028