Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3111g00006 ATGGACCACCACAAAGAGAGAATTAAGAGTGGGTGCCAGAAGATTTTGGAAGGAATAAATTCAATGTCCTTGGTAAATTTAGATGACCAACAAGTCCATTCCTTAGTGATGATGAGAGAAATAGCACGTGGGGTTGTTGATGATCGAGATAGGAAGGTGACTAAGAATGATGTGATTACTGCCTTGCGCTATAGCATCGAGAAAATGGTGTGTGCATCCAGGGATATCGTGCAAATATTAAGTAGGATGTCTTATGAAGGCTTGGATGACCAGAGGATGCATCTAGTATTGAGGATGAAAGAAATTGCACATGGGATTATGGATAAACAACCTACTGTTGCACCTGACTTACTTGCAGAACAAGGGGTTGGCTTTGTGGATGAAGGGATGAGAATTAGTCCCATGGCCATGGTTGAGTCAACCAAGATTAGCAATGGGGATGCCGTAATTGATGGGGCTCAAAGCATGACACATGAAGATGATATATTGGACGTGGAACATGTTTTAAGATTTGAAAATGGGATAAATGAAGTACAGGAATCTCTGTTGCCATCATGCTTTGAGCAATTTCTTCTGTGGCCTGCTGATGATTGCATCACCTTAGAGTGGGTTCAGGACATGATTTTCATCCTTGAGCAGGCTACACAGAAGAAGATGTTGCCATCTGAATTCTGTCATGTCGTGCCAACCATTTTGGTGGACAAATTGACAGATGCTGCTTGCAGTATTTTGTGTAAAGAACCAAATTGTGTGGAGATTAATTGTCAAGAAGAAGATTCAAGAGTCATTGTAGTAGGCGATATACATGGGCAGTTTCATGATTTAATGTTTCTTTTTAAGCATGCAGGAATGCCCTCTGAGAACCAGTTTTATGTTTTCAATGGAAATTATGTAGATAAAGGAGCTTGGGGCATTGAAGTCTGTTTGGTCTTGCTGGCTTGGAAGATCCTGATGCCTGACAGAGTATATCTGCTCCGTGGAAATCATGAATCAAGATATTGCACTGCAAGATATGGTTTTAAAAAGGAGGTGTGGACCAAATATGGCGATCAAGGTGAAGCTGTCTACAATAAATTCCTAGAGTGTTTCAAGGAGCTTCCGTTAGCTTCAGTTATTGCCAATTGTGTTTATACTACTCACGGAGGGCTTTTCCGTAGCATACATGCTGCCCCTTCACGAAAGCCAAAACGGAAGAAGACACAAAGAGTGGATCTTGGTTCTTTAGCTGAGTTATCTGAAGTTAAAAGAGCTTGTATAGATTGCCCTTATGAAGGTCCTAACATATTATTGAGTGACATTCTCTGGTCAAAACCATCTCATAGGGATGGTCTGAGGGATAATGCAGGTCGAAAGTTAGGTTTATGGTGGGGTCCTGATTGCACCGAGGCTTTCTTAAAGCAGCACAATTTAAAGCTGATCATCAGATCACATGAAGGACCTGATGCAAGGGCTGGCAGGGATGATTTTGGGGATATGTTGAATGGATACAGCATAGATCATGATGGAGAATCAGGAAAGCTATATACACTTTTTAGTGCTCCAGACTACCCACAGTTTGGTAAAAGGAGATATAACAATGAGGGAGCATATGCACTATTGAAGTGGCCAAATTTCGAAAGTCCTTCCTTTCACTCATTCAAATCAGCAGAAAGACCAATGGTGGATCCGTATGTTGATTTTGATGCTAATGACATGGACTTGAGTAAACTTGACTCGTCTCAAATCGCCTCAACCTCTTTCTTTTCAGATCCTCAAAGATTTTATCCAGCTGGAATGAGACCAGGGTTTAACTTTGAGGCATTAGGCATATATAATGCCCCTTGTTGGAGTGTTCAGATTCCTGATGGTTCAGGCGGCACTCAAGTTGTGCAGGTTCCAAGGGCTCCTTTGGTGGAAGGATTGCCTCTGCCTCCCAATATACAGGAGCCACACAAGGCTGCTTATGAGTATTTGTTCGAGCTCGTTGCTGCCCTCAAACATATGGTTATAACAAGGGAGACTGAGAACAGGGCCCGTGTGTCAGCTTTGCGTAGTAGAGCAAGGAAACGAAAGGGTAGGGGTAACAGTTGA 2070 0.4237 MDHHKERIKSGCQKILEGINSMSLVNLDDQQVHSLVMMREIARGVVDDRDRKVTKNDVITALRYSIEKMVCASRDIVQILSRMSYEGLDDQRMHLVLRMKEIAHGIMDKQPTVAPDLLAEQGVGFVDEGMRISPMAMVESTKISNGDAVIDGAQSMTHEDDILDVEHVLRFENGINEVQESLLPSCFEQFLLWPADDCITLEWVQDMIFILEQATQKKMLPSEFCHVVPTILVDKLTDAACSILCKEPNCVEINCQEEDSRVIVVGDIHGQFHDLMFLFKHAGMPSENQFYVFNGNYVDKGAWGIEVCLVLLAWKILMPDRVYLLRGNHESRYCTARYGFKKEVWTKYGDQGEAVYNKFLECFKELPLASVIANCVYTTHGGLFRSIHAAPSRKPKRKKTQRVDLGSLAELSEVKRACIDCPYEGPNILLSDILWSKPSHRDGLRDNAGRKLGLWWGPDCTEAFLKQHNLKLIIRSHEGPDARAGRDDFGDMLNGYSIDHDGESGKLYTLFSAPDYPQFGKRRYNNEGAYALLKWPNFESPSFHSFKSAERPMVDPYVDFDANDMDLSKLDSSQIASTSFFSDPQRFYPAGMRPGFNFEALGIYNAPCWSVQIPDGSGGTQVVQVPRAPLVEGLPLPPNIQEPHKAAYEYLFELVAALKHMVITRETENRARVSALRSRARKRKGRGNS 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3111g00006 689 PRINTS Serine/threonine phosphatase family signature 506 522 IPR006186 GO:0016787
Gabi3111g00006 689 PRINTS Serine/threonine phosphatase family signature 291 318 IPR006186 GO:0016787
Gabi3111g00006 689 PRINTS Serine/threonine phosphatase family signature 261 288 IPR006186 GO:0016787
Gabi3111g00006 689 PRINTS Serine/threonine phosphatase family signature 361 387 IPR006186 GO:0016787
Gabi3111g00006 689 PRINTS Serine/threonine phosphatase family signature 324 348 IPR006186 GO:0016787
Gabi3111g00006 689 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 34 563 - -
Gabi3111g00006 689 ProSitePatterns Serine/threonine specific protein phosphatases signature. 325 330 IPR006186 GO:0016787
Gabi3111g00006 689 SUPERFAMILY Metallo-dependent phosphatases 218 556 IPR029052 -
Gabi3111g00006 689 Gene3D - 197 581 IPR029052 -
Gabi3111g00006 689 SMART pp2a_7 228 550 IPR006186 GO:0016787
Gabi3111g00006 689 Pfam Calcineurin-like phosphoesterase 261 480 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3111g00006 Gabi-Chr3111 58239 64015 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3111g00006 191 472 Calmodulin-binding Proteins AT5G63870 51.712 8.42e-98 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3111g00006 K04460 - qsa:O6P43_002566 976.852