Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3110g00026 ATGTTGATGCCGTTTACATTGAAAAATATAAGACGAGCCATCAATAGATTTAACCACTTGAATAAGGCATGGACCCAGATTCAGAAAAGTGGTGTTAGCAGTTATGCTTCATCATCATCACCATCCAATCTTGTGTTGTATTCTTACTGGCAAAGCTCCTGCTCATGGCGTATCCGTTTTGCTTTATGTCTCAAAGGGATCCCATATGAGTACAAAGCAGTGGACCTTTTAAAAGGAGAGCAGTTCAGTCCAGAGTTTGAGAGATTAAGTCCTCTGCATTATGTTCCAGTATTAGTTGATGATAATGTGGTGGTTTCAGACTCTTTTGCAATATTTCTGTATTTGGAGGAAAAATATACCCAGAAGCCACTGTTGCCAGTTGTTCCTCAGCTCAGAGCTCTCAATCTTCAGGTAGCAAGTATTGTCAACTCCAGTATACAACCTCTTCATATGATTAATGTTCTGAAAGATATGGAGGAAATGTTTGGCGCAGAACCAGAACTGTGGGCCCAATTTACCATAGACAAAGGTTTCTTCGCTCTTGAGAAGTTATTGAAGGATTTTTCTGGTACATATGCCACAGGGGAACATATCTATATGGCTGATGTATTTTTGGCCCCACAGATTACGCAGGCACTTCAGAGGTTTGATATTGATATGTCCAAATTCCCTATCCTGAGTAGGTTGTATGAAACATACAAGGCTTTGCCAGAGTTCCAGGCTTCATCACCCCAAAGACAACCTGATGCCTACATTCACAATTCTTAA 768 0.4049 MLMPFTLKNIRRAINRFNHLNKAWTQIQKSGVSSYASSSSPSNLVLYSYWQSSCSWRIRFALCLKGIPYEYKAVDLLKGEQFSPEFERLSPLHYVPVLVDDNVVVSDSFAIFLYLEEKYTQKPLLPVVPQLRALNLQVASIVNSSIQPLHMINVLKDMEEMFGAEPELWAQFTIDKGFFALEKLLKDFSGTYATGEHIYMADVFLAPQITQALQRFDIDMSKFPILSRLYETYKALPEFQASSPQRQPDAYIHNS 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3110g00026 255 Gene3D Glutaredoxin 46 121 - -
Gabi3110g00026 255 PANTHER MALEYLACETOACETATE ISOMERASE 44 250 - -
Gabi3110g00026 255 Gene3D - 125 251 - -
Gabi3110g00026 255 SUPERFAMILY Thioredoxin-like 38 126 IPR036249 -
Gabi3110g00026 255 CDD GST_C_Zeta 129 247 IPR034330 -
Gabi3110g00026 255 FunFam Glutathione S-transferase Z1 42 126 - -
Gabi3110g00026 255 CDD GST_N_Zeta 44 116 IPR034333 -
Gabi3110g00026 255 FunFam Maleylacetoacetate isomerase 128 253 - -
Gabi3110g00026 255 Pfam Glutathione S-transferase, N-terminal domain 46 123 IPR004045 -
Gabi3110g00026 255 SUPERFAMILY GST C-terminal domain-like 123 251 IPR036282 -
Gabi3110g00026 255 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 128 252 IPR010987 -
Gabi3110g00026 255 SFLD Glutathione Transferase (cytosolic) 44 234 IPR040079 -
Gabi3110g00026 255 SFLD Main (cytGST) 44 234 - -
Gabi3110g00026 255 Pfam Glutathione S-transferase, C-terminal domain 165 240 IPR004046 -
Gabi3110g00026 255 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 42 123 IPR004045 -
Gabi3110g00026 255 NCBIfam maleylacetoacetate isomerase 46 250 IPR005955 GO:0003824|GO:0005737|GO:0009072
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3110g00026 Gabi-Chr3110 359158 363272 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3110g00026 34 249 Glutathione S-transferase Gene Family AT2G02380 49.770 2.04e-72 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3110g00026 K01800 - gmx:100796296 371.318