Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3110g00012 ATGGATTGTGGAGGTAAAATTGGTGGAAGTGAAAGAAGTGGGCCTTGTGGTGCTTGCAAATTCCTGAGGAGAAAGTGTGTGAAGGGTTGCATATTTGCACCATACTTTGACCCTGACCAAGGAACTGCTCATTTTGCTGCTGTGCATAAGGTTTTTGGTGCTAGCAATGCCTCTAAGTTACTCATGCGTATCCCAGTTCATAAACGTCTTGATGCTGTTGTTACTCTCTGCTATGAGGCTCTGGCTAGGGTTAGAGACCCTGTTTATGGTTGTGTTGGTCACATCTTTGCTCTTCAACAACAGGTCATGAACTTGCAGGCAGAGTTAACATATGTTCAGGCCCGTCTTGCCACCATGCAGCGCCTACCAATCCCAGTAGCTCCTCCTCCTCTTCCACACCTTCAAAGTTCTTCACCAACAAGTCTTCATTCTTCCTCAGATCACTTGGCATCAAATGCTGACATGCAAATTGCCTCTAACATATCCATGCACTTTGATCCTCTCCAACCACATTCAACATCATTTGACTTAAGCAGCTTTTTCAATCCATCAGATCAACAACTCGAGGATGGGGAACTCCGTGTTTTGGCTCGAGAATTTGTGTCCAGGTACTTGCCTGGAGTAAGATTCCAGCCACCTAATTCTCACTGA 651 0.4547 MDCGGKIGGSERSGPCGACKFLRRKCVKGCIFAPYFDPDQGTAHFAAVHKVFGASNASKLLMRIPVHKRLDAVVTLCYEALARVRDPVYGCVGHIFALQQQVMNLQAELTYVQARLATMQRLPIPVAPPPLPHLQSSSPTSLHSSSDHLASNADMQIASNISMHFDPLQPHSTSFDLSSFFNPSDQQLEDGELRVLAREFVSRYLPGVRFQPPNSH 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3110g00012 216 ProSiteProfiles LOB domain profile. 14 116 IPR004883 -
Gabi3110g00012 216 PANTHER LOB DOMAIN CONTAINING PROTEIN 13 153 - -
Gabi3110g00012 216 Pfam Lateral organ boundaries (LOB) domain 15 113 IPR004883 -
Gabi3110g00012 216 MobiDBLite consensus disorder prediction 127 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3110g00012 Gabi-Chr3110 249761 255657 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3110g00012 14 212 AS2 family AT4G00210 55.607 2.48e-74 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gabi3110g00012 LOB 5.6e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3110g00012 - - gmx:100791377 332.798