Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3110g00011 ATGAGTATAAACTCTAGTTGTAGCGGAAGTGCTGGTGGTGGAAGCAACACCGGCGGTGGTAACGGCGTCGGTGGTGGTGGCCCTTGTGGCGCGTGCAAGTTTTTGAGGAGGAAGTGCGTGCAGGGTTGTATCTTTGCACCATACTTCGATTCAGAACAAGGTGCCACACACTTTGCGGCGGTTCACAAAGTTTTCGGTGCCAGCAACGTTTCTAAGCTTCTTCTGAACATTCCGGTTCATAAGAGGCTTGATGCGGTGGTCACCATTTGTTATGAAGCTCAGGCACGGCTGAGAGACCCCGTGTATGGTTGCGTTGCTCATATCTTCGCTCTTCAGCAACAGGTGGTAAGTTTACAAGCAGAACTCTCCTACTTACAAGGTCACCTTGCCACACTAGAGTTACCCCATCCACCACCACCTTCTCCGCCCCAAATAACCATGGCCCCACCAGTGATCTCAATAGCTGACCTTCCACCAGCCTCTTCCTCCACCGTGCCAGCTACATATGACTTATCTTCACTTTTTGATCCCATGGCCCAAACTTCTTCATGGGCCATGCAGCAGAGGCCCATAGACCCACATCAATTTTTGGGTAGTGGTCCATCAACAACCACTAGCAGTAGTGGTGGTGATCTTCAAGCATTGGCTCGTGAGCTTTTGAATAGACAAGGATCTGCTCCTGTTGCTCATGTAGCATGCTCTAATGCCTCATCATCTCACTCTCTTGCCAAATGA 735 0.502 MSINSSCSGSAGGGSNTGGGNGVGGGGPCGACKFLRRKCVQGCIFAPYFDSEQGATHFAAVHKVFGASNVSKLLLNIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQAELSYLQGHLATLELPHPPPPSPPQITMAPPVISIADLPPASSSTVPATYDLSSLFDPMAQTSSWAMQQRPIDPHQFLGSGPSTTTSSSGGDLQALARELLNRQGSAPVAHVACSNASSSHSLAK 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3110g00011 244 MobiDBLite consensus disorder prediction 191 210 - -
Gabi3110g00011 244 ProSiteProfiles LOB domain profile. 27 129 IPR004883 -
Gabi3110g00011 244 Pfam Lateral organ boundaries (LOB) domain 28 126 IPR004883 -
Gabi3110g00011 244 PANTHER LOB DOMAIN CONTAINING PROTEIN 26 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3110g00011 Gabi-Chr3110 214433 218263 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3110g00011 30 227 AS2 family AT2G45420 65.877 3.70e-81 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gabi3110g00011 LOB 2.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3110g00011 K21994 - gmx:100779541 336.265