Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3104g00002 ATGCATGACGATGAGGAATGTCGCCCCATTCCCTCGTGGGTGAATAAAAAATCAAGAACTGCAAAGAATGCATCAACACCAACACCAACACCATCACCACCAACACCATCCCCACCAACACTGTCACCGCCATTACCACCGTCGCTGCCGCCACAGCTGCCAGCATCATCGCAACAGTTGTTACCACCACTCCCACCAGCGGTTCTGCCTGATGAATTCAAGAACCGTATCAGAGAGTTGAACGGCAGCGACATTCAATTTGTGATGAGCAAGAAACTCTTCCAGACAGATTTGACCCTGAATCATGACCGTTTATCAATGCCGATGAGAGAAGTTCGTTGTGATTTCCTGACCAAGGCTGAGAAAGCAACATTGGATGAGAGAGATTGCGCAAAAAGAAAACTTGTGGGAGTTGAACTGAAGATGTTGGATCCATCTCTTACTGAGTGTACATTGTCATTGAAGAAGTGGAACATGACAAGCACAAGCATATACTGTCTCACCAAAAACTGGAAGAGTGTTGTCACCCATAACAATTTGCAAAAAGACGATCAACTCCAAATATGGTCTTTCAGAGTGGATGGCAAATTACATTTTGTATTAAATAAACTCTGA 615 0.4439 MHDDEECRPIPSWVNKKSRTAKNASTPTPTPSPPTPSPPTLSPPLPPSLPPQLPASSQQLLPPLPPAVLPDEFKNRIRELNGSDIQFVMSKKLFQTDLTLNHDRLSMPMREVRCDFLTKAEKATLDERDCAKRKLVGVELKMLDPSLTECTLSLKKWNMTSTSIYCLTKNWKSVVTHNNLQKDDQLQIWSFRVDGKLHFVLNKL 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3104g00002 204 CDD B3_DNA 91 203 IPR003340 GO:0003677
Gabi3104g00002 204 Gene3D - 69 204 IPR015300 -
Gabi3104g00002 204 Pfam B3 domain-containing protein At2g31720-like 75 176 IPR005508 GO:0003677
Gabi3104g00002 204 SUPERFAMILY DNA-binding pseudobarrel domain 89 201 IPR015300 -
Gabi3104g00002 204 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 61 204 IPR005508 GO:0003677
Gabi3104g00002 204 MobiDBLite consensus disorder prediction 27 67 - -
Gabi3104g00002 204 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3104g00002 Gabi-Chr3104 33151 33765 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3104g00002 77 203 B3 DNA Binding Superfamily AT1G05930 30.233 4.24e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3104g00002 - - gmx:102663833 159.073