Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3103g00036 ATGGAGGACCACCAGAAGGGGAAGCATGGCAAGGAGGAGAAGGCAAGGGAAGAGGTTCGGTACCGCGGCGTCAGGCGGCGGCCGTGGGGGAAGTATGCGTCGGAGATAAGAGATCCATCAAAGCAAGGGACAAGGGTGTGGTTGGGGACATTTGATACTGCTGAAGAAGCAGCTCGAGCTTATGATCGAGCAGCCTTTAACATGAGGGGTCATCTTGCAATTCTCAATTTCCCTAGTGAGTACTATTCTCAAATAAGGGGCTCACCACCATATCCACCTCATTTAGCATCATCATCGTCATCATCATCATCATCATCACCATCATCCTATGGAAGTTCTTCTGGTGCACGACAGAATCATCATGTTATCGAGATCGAGTGTTTGGATGATAAGGTGTTGGAGGATCTTCTTGAGTCAGAGGAGCACAAGAAGAAAAAGAACGGAGATTGA 450 0.4844 MEDHQKGKHGKEEKAREEVRYRGVRRRPWGKYASEIRDPSKQGTRVWLGTFDTAEEAARAYDRAAFNMRGHLAILNFPSEYYSQIRGSPPYPPHLASSSSSSSSSSPSSYGSSSGARQNHHVIEIECLDDKVLEDLLESEEHKKKKNGD 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3103g00036 149 CDD AP2 20 78 IPR001471 GO:0003700|GO:0006355
Gabi3103g00036 149 Pfam AP2 domain 20 71 IPR001471 GO:0003700|GO:0006355
Gabi3103g00036 149 ProSiteProfiles AP2/ERF domain profile. 20 78 IPR001471 GO:0003700|GO:0006355
Gabi3103g00036 149 MobiDBLite consensus disorder prediction 93 118 - -
Gabi3103g00036 149 MobiDBLite consensus disorder prediction 83 118 - -
Gabi3103g00036 149 Gene3D AP2/ERF domain 19 79 IPR036955 GO:0003700|GO:0006355
Gabi3103g00036 149 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Gabi3103g00036 149 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Gabi3103g00036 149 SUPERFAMILY DNA-binding domain 20 79 IPR016177 GO:0003677
Gabi3103g00036 149 PANTHER DNA-BINDING DOMAIN 10 142 IPR044808 GO:0003700|GO:0009873
Gabi3103g00036 149 FunFam Ethylene-responsive transcription factor 2 19 80 - -
Gabi3103g00036 149 SMART rav1_2 20 84 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3103g00036 Gabi-Chr3103 415169 415623 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3103g00036 18 144 AP2-EREBP Transcription Factor Family AT3G23230 64.844 1.12e-48 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Gabi3103g00036 AP2 4.4e-17 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3103g00036 - - gmx:100793703 181.03