Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3103g00035 ATGGATGAAGAAGGATCAAGGGGAAGGGCCAAGGATGACGCCGGAGATGTCCGGTATCGAGGCGTGCGCCGGCGGCCATGGGGGAAGTTTGCGGCTGAGATTCGTGACTCGACAAGGCAGGGTCAGAGGGTGTGGCTAGGAACTTTCAACACGGCGGAGGAAGCAGCCAGAGCCTATGACAGAGCTGCTTATAACATGAGAGGTGCATTTGCAATCCTTAACTTCCCAAATGAATACCCTAGTGGTAGTGGCAGTGCTGCCTCTCGTTCCTCTGCTGCTGCTTCACCATCATCATCATCTTCTTCCTCTGCTTCAAGGAATGCAAATGAGCAAGGAAGACAAGTGTTTGAGTTCGAGTACTTTGATGACAATTTGTTAGAGGAGCTTCTTGATTGTGAAGAAAAAAAGAAAAAGGGAACTTGA 423 0.4965 MDEEGSRGRAKDDAGDVRYRGVRRRPWGKFAAEIRDSTRQGQRVWLGTFNTAEEAARAYDRAAYNMRGAFAILNFPNEYPSGSGSAASRSSAAASPSSSSSSSASRNANEQGRQVFEFEYFDDNLLEELLDCEEKKKKGT 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3103g00035 140 ProSiteProfiles AP2/ERF domain profile. 18 76 IPR001471 GO:0003700|GO:0006355
Gabi3103g00035 140 Pfam AP2 domain 18 68 IPR001471 GO:0003700|GO:0006355
Gabi3103g00035 140 SUPERFAMILY DNA-binding domain 18 77 IPR016177 GO:0003677
Gabi3103g00035 140 CDD AP2 18 77 IPR001471 GO:0003700|GO:0006355
Gabi3103g00035 140 Gene3D AP2/ERF domain 17 77 IPR036955 GO:0003700|GO:0006355
Gabi3103g00035 140 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Gabi3103g00035 140 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Gabi3103g00035 140 PANTHER DNA-BINDING DOMAIN 13 135 IPR044808 GO:0003700|GO:0009873
Gabi3103g00035 140 FunFam Ethylene-responsive transcription factor 2 18 77 - -
Gabi3103g00035 140 SMART rav1_2 18 82 IPR001471 GO:0003700|GO:0006355
Gabi3103g00035 140 MobiDBLite consensus disorder prediction 80 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3103g00035 Gabi-Chr3103 393720 394221 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3103g00035 13 137 AP2-EREBP Transcription Factor Family AT3G23230 65.079 2.10e-47 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gabi3103g00035 AP2 2.6e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3103g00035 - - gmx:100775830 176.407