Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3103g00032 ATGGATTCGTTAGAGGATTTTCTCGATTTCAATTTCATCCATGGTTCCCCGCCTGCCCCCGCCGATTTCCTTTGGTCCAATCAAAGTGGGAGCACGGAAATTGAATTTTCAGGTGGCGGTGCTGTCGACTCTCAAAATAACACCAGGAAGAGGGGTCGCACTAATTCATGTAGCGAGGCAGGAACAAAAGCTTGCCGCGAGAAGATGCGGAGGGAGAGACTCAATGAAAGATTTTGTGACTTGAGCTCTGTCTTGAAACCTTGGAGACCTGTCAAAACTGATAAGCTGGCGATACTTGATGATGCTATCAGAGTCTTGAAGCAACTTGAAACTGAAGCTCAGGGACTCAAAGAAACAAATGAAAAATTATTAGAGGAAATAAAATGTTCAAAGGTAGAGAAAAACGATCTTCGTGAAGAGAAACTTGTTTTGAAAGCAGATAAAGAAAGGATCGAGAGGCAGTTGAAAGATTTTTCGGTTTCACCTGCAGGGTTTATGGCTCCCAATGTTGCTGCTTTTCAAGCAGGGGTCAAAAAGATGGCTGTTTTTCCAAACTATGGTTATATCCCAATGTGGCAATGTCTTCCCCCAGCTACCCGTGATACATCCCAAGATCATGAGCTCAGGCCTCCTGCTGCATAG 642 0.4439 MDSLEDFLDFNFIHGSPPAPADFLWSNQSGSTEIEFSGGGAVDSQNNTRKRGRTNSCSEAGTKACREKMRRERLNERFCDLSSVLKPWRPVKTDKLAILDDAIRVLKQLETEAQGLKETNEKLLEEIKCSKVEKNDLREEKLVLKADKERIERQLKDFSVSPAGFMAPNVAAFQAGVKKMAVFPNYGYIPMWQCLPPATRDTSQDHELRPPAA 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3103g00032 213 CDD bHLH_AtILR3_like 63 138 - -
Gabi3103g00032 213 PANTHER BHLH TRANSCRIPTION FACTOR 17 213 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
Gabi3103g00032 213 SMART finulus 64 115 IPR011598 GO:0046983
Gabi3103g00032 213 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 63 123 IPR036638 GO:0046983
Gabi3103g00032 213 Pfam Helix-loop-helix DNA-binding domain 62 110 IPR011598 GO:0046983
Gabi3103g00032 213 Coils Coil 99 154 - -
Gabi3103g00032 213 MobiDBLite consensus disorder prediction 37 59 - -
Gabi3103g00032 213 Gene3D - 66 146 IPR036638 GO:0046983
Gabi3103g00032 213 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 58 109 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3103g00032 Gabi-Chr3103 356171 360260 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3103g00032 37 213 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G14410 61.957 1.94e-70 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gabi3103g00032 HLH 8.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3103g00032 - - gmx:100787583 304.679