Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3103g00019 ATCTCTGCAGCAGCAACAACTCTGGCTAACCCTTGGTGGACTGGTCAGGGTGGGTTAACTGGGGTTGACCCAGGAACCCATTCACCTGGCCTGAACAAACGCCACACAGACCTAGTAATCAACGAATTAAGCAGTGGTAACAACAATAGAGATGAAGATGAAGATGAAGAAAACAGAGATAACGGAGATGAACCAAAAGAGGGTGCAATTGAGGTTGGAAGCCGAAGACCAAGAGGAAGACCACCTGGATCCAAAAACAAGCCAAAACCACCCATCTTTGTTACAAGGGATAGTCCACATGCCTTGAGGAGTCATGTCATGGAGATAGCTGGAGGAGCTGATGTTGCTGAAAGTGTTGCCCAATTTGCAAGGAGGCGTCAGCGTGGTGTTTGTGTCCTCAGTGGAAGTGGCTCTGTGGCTAATGTTACCCTTCGACAACCTGCTGCTCCTGGTGCTGTTGTGGCACTTCATGGAAGGTTCGAGATTCTATCCTTAACTGGGGCATTCCTACCAGGTCCTGCCCCTCCTGGCTCTACTGGTCTTACAGTGTATCTTGCTGGAGGACAGGGTCAAGTTGTTGGAGGAAGTGTTGTTGGGTCTCTAGTTGCAGCTGGACCTGTTATGGTTATTGCTGCAACTTTTGCTAATGCAACTTATGAGAGACTTCCACTTGATGATGATGATGAGGGGCCTAGCTCTGCCGCGGCTGCCGCGGCGCAAGGAGGAGCCGCCAGCGGATCGCCGCCTCCGCAGCAGCCGGGGATTGGAAGCAGTGGGAGTCAGTTTCAGGGTGGACTTACAGATCCATCATCTCTGCCTTTGTATAATCTTCCTCCAAATCTGTTGCCCAATGGAGGGCAGATGGGGCATGAAGCTTTTGCTTGGGCTCATGGAAGGCCACCTTATTGA 909 0.5116 ISAAATTLANPWWTGQGGLTGVDPGTHSPGLNKRHTDLVINELSSGNNNRDEDEDEENRDNGDEPKEGAIEVGSRRPRGRPPGSKNKPKPPIFVTRDSPHALRSHVMEIAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGAFLPGPAPPGSTGLTVYLAGGQGQVVGGSVVGSLVAAGPVMVIAATFANATYERLPLDDDDEGPSSAAAAAAQGGAASGSPPPQQPGIGSSGSQFQGGLTDPSSLPLYNLPPNLLPNGGQMGHEAFAWAHGRPPY 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3103g00019 302 PIRSF ESCAROLA 20 302 IPR014476 GO:0003680
Gabi3103g00019 302 CDD DUF296 103 186 IPR005175 -
Gabi3103g00019 302 MobiDBLite consensus disorder prediction 245 274 - -
Gabi3103g00019 302 Pfam Plants and Prokaryotes Conserved (PCC) domain 103 215 IPR005175 -
Gabi3103g00019 302 SUPERFAMILY AF0104/ALDC/Ptd012-like 101 226 - -
Gabi3103g00019 302 Gene3D - 102 229 - -
Gabi3103g00019 302 MobiDBLite consensus disorder prediction 222 288 - -
Gabi3103g00019 302 FunFam AT-hook motif nuclear-localized protein 102 229 - -
Gabi3103g00019 302 ProSiteProfiles PPC domain profile profile. 99 237 IPR005175 -
Gabi3103g00019 302 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 48 298 IPR014476 GO:0003680
Gabi3103g00019 302 MobiDBLite consensus disorder prediction 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3103g00019 Gabi-Chr3103 256511 257419 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3103g00019 8 302 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 60.201 1.74e-101 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3103g00019 - - var:108341460 392.119