Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi30g00011 ATGGGAACAAATCTCAGCATTCCGAAAACTGAAAAGTTTTCTGAAGATGGTGAAAATGACCGTCTTAGATATGGCTTATCATCTATGCAAGGTTGGCGTGCAACAATGGAAGATGCACATGCTGCACATCTTGATCTGGATGCGTCCACTTCGTATTTTGGTGTTTATGATGGTCATGGAGGTAAGGTGGTTGCCAAGTTTTGTGCCAAGTATCTTCACCAACAGGTGCTCAAGAGTGAAGCATACATAGCTGGAGATGTAGGAACCGCCCTTCAGAAAACATTTTTCAGAATGGATGAGATGATGCGCGGTCAAAGGGGATGGAGGGAATTATCAGCCTTGGGTGATAAGATAAACAAGTTTAATGGGAGGATAGAAGGATTGATTTGGTCTCCACGTAGCTGTGATGGTAAAGACCAAGGTGATGATTGGGCCTTTGAGGAGGGGCCTCATTCTGACTATGCTGGACCAACTTCAGGAAGCACTGCCTGTGTTGCAATTATTAGAAACAATCAACTTTTTGTTGCAAATGCTGGTGATTCACGTTGTGTAATATCTAGGAAGGGTCAGGCATACAATTTGTCTAGAGACCACAAACCTGATCTTGAGATTGAGAAGGAAAGAATCTTAAAGGCTGGTGGTTTTATTCATGCAGGACGAGTTAATGGGAGTCTAAATCTTGCAAGAGCTATAGGTGACATGGAATTTAAGCAGAATAGATTTCTTCCTGCTGAAAAACAAATTGTGACCGCTAATCCAGATATAAACACTGTTGACCTTTGTGATGAAGATGAATTTATAGTACTAGCTTGTGATGGCATATGGGATTGCCTGTCAAGCCAACAATTGGTAGATTTTGTACGTCAACAACTGCTCTTGGAAACAAAACTTTCTGCGGTTTGTGAAAGAGTATTAGATCGGTGTTTGTCACCATCAATTGCTGTTGGTGAGGGATGTGATAACATGACCATGATCTTGGTGCTGTTCAAGAAACCGGCTCAGTCCAGTGCTCCAGCACAAGAACAATTCTCTTCAAATGAACAAGCTGCATCTGAACCAAGACTTTGA 1068 0.4204 MGTNLSIPKTEKFSEDGENDRLRYGLSSMQGWRATMEDAHAAHLDLDASTSYFGVYDGHGGKVVAKFCAKYLHQQVLKSEAYIAGDVGTALQKTFFRMDEMMRGQRGWRELSALGDKINKFNGRIEGLIWSPRSCDGKDQGDDWAFEEGPHSDYAGPTSGSTACVAIIRNNQLFVANAGDSRCVISRKGQAYNLSRDHKPDLEIEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNRFLPAEKQIVTANPDINTVDLCDEDEFIVLACDGIWDCLSSQQLVDFVRQQLLLETKLSAVCERVLDRCLSPSIAVGEGCDNMTMILVLFKKPAQSSAPAQEQFSSNEQAASEPRL 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi30g00011 355 MobiDBLite consensus disorder prediction 335 355 - -
Gabi30g00011 355 PANTHER PROTEIN PHOSPHATASE 2C 19 327 IPR015655 GO:0004722|GO:0006470
Gabi30g00011 355 CDD PP2Cc 23 329 IPR001932 -
Gabi30g00011 355 Gene3D - 1 330 IPR036457 -
Gabi30g00011 355 SUPERFAMILY PP2C-like 4 331 IPR036457 -
Gabi30g00011 355 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Gabi30g00011 355 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Gabi30g00011 355 Pfam Protein phosphatase 2C 23 104 IPR001932 -
Gabi30g00011 355 Pfam Protein phosphatase 2C 155 311 IPR001932 -
Gabi30g00011 355 SMART PP2C_4 13 327 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi30g00011 Gabi-Chr30 95602 101775 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi30g00011 1 341 PP2C-type Phosphatase Gene Family AT2G25070 75.953 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi30g00011 K17499 - qsa:O6P43_015776 611.683