Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi30g00008 ATGGCTGGTTCTTCAACAACTCCCTCAGCTTCTCTTTTGCTCCTATTGATCCTTCTCTTTTGCTTCTCAGCAGCAGCTAAGGAAATCTTGGTTGGAGGCAACATAGATGCATGGAAGATTCCATCTTCTGAATCAGACTCACTAAATCAATGGGCAGAAAGGTCTAGGTTCCAAGTTGGAGACCATCTTGTTTGGAAATATGATGGTGGGAAAGATTCAGTTTTGCAAGTAAGCAAGGAGGATTATCCTAATTGCAACATCACAAACCCAATTAAAGAGTACAGTGATGGGAACACTAAGGTGAAGCTTGACCATCCTGGACCATTCTATTTCATCAGTGGAGAAAAGGGTCACTGTGAGAAGGGTCAGAAGCTAATTGTGGTGGTTTTGACTCCAAGGGGAAGCAGCAGGTACATTGGGATTTCACCTGCACCTTCTTCTGCAGAGTTGGAAGAAGGTCCAGCTATTGCTCCTACTAGCAGTGCCACAGCTTTGCACAGTGCCCTTGTGATGTCTCTTGGAGTATTATTTGCTATGTGGAGTTTCTGA 549 0.4426 MAGSSTTPSASLLLLLILLFCFSAAAKEILVGGNIDAWKIPSSESDSLNQWAERSRFQVGDHLVWKYDGGKDSVLQVSKEDYPNCNITNPIKEYSDGNTKVKLDHPGPFYFISGEKGHCEKGQKLIVVVLTPRGSSRYIGISPAPSSAELEEGPAIAPTSSATALHSALVMSLGVLFAMWSF 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi30g00008 182 ProSiteProfiles Phytocyanin domain profile. 27 131 IPR003245 GO:0009055
Gabi30g00008 182 Pfam Plastocyanin-like domain 38 123 IPR003245 GO:0009055
Gabi30g00008 182 Gene3D - 25 133 IPR008972 -
Gabi30g00008 182 FunFam Early nodulin-like protein 1 26 134 - -
Gabi30g00008 182 SUPERFAMILY Cupredoxins 26 130 IPR008972 -
Gabi30g00008 182 CDD OsENODL1_like 27 130 IPR041846 -
Gabi30g00008 182 PANTHER BLUE COPPER PROTEIN 27 152 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi30g00008 Gabi-Chr30 61323 61981 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi30g00008 9 182 Phytocyanin Superfamily AT4G31840 51.685 1.83e-61 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi30g00008 - - gmx:100527857 253.832