Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3097g00003 ATGGATGGTGGTGATAATGGTCTTAACATACGTAATTGGGGTTACTATGAACCTGCTACGTCCTATAAGAGCCATCTGGGGCTGCAGCTGATGTCTTCCATGCCGGAAAAACCGATGCTTGGAGGGCGCAATGCTGCAGTTTTATCTGGCACTAATGGGGCATTTCACCTTAGGGACATTGGGATGCCCCAAACTACATACCCTATGGATTACAACATGAGGGATGGATCATGGATTAGTAGTCAGAGAGATAAGTATATGAATATGATACCTACAAACCCGACTTATGGTGGTATCCCGGAGACGTCTTCAGCACATCATATTCAAATGATTCAACAACCTGAATTGTCAAAGGAAGAAATACCAATGGAAGAGGCACCTGTTGTTGAGAAGGCGAATGGCGCTAGGAAGAAAAGGCAGGGTCCCAAGGTGCCCAAATCCCCCAAGGCAAAGAAGCCCAAGAGGGGTCCTCGCGTCCCAAAGGATGAGAATACTCCTTCTGTTCAACGAGCAAGGGTTCCGAAGAAAACTACTGAAATTGTAATAAACGGGCTTGATTTGGATATTTCCAGTATTCCAATTCCTGTTTGTTCATGCACTGGGACACCTCAACAGTGTTATAGATGGGGATCTGGAGGATGGCAGTCTGCGTGCTGCACAACTGGCATGTCAATGTATCCTTTGCCTATGAGTACCAAGCGGCGTGGTGCTAGGATAGCTGGAAGGAAAATGAGTATAGGAGCATTTAAGAAAGTTTTAGAGAAACTTGCGGCCGAGGGTTATAACTTTTCTAATCCAATTGATTTGAGGACTTATTGGGCAAAACATGGCACCAACAAGTTTGTCACTATCAGGAGGAAATTTTTATCTGTTCAAAAACCTATCGGTGACTGA 894 0.4485 MDGGDNGLNIRNWGYYEPATSYKSHLGLQLMSSMPEKPMLGGRNAAVLSGTNGAFHLRDIGMPQTTYPMDYNMRDGSWISSQRDKYMNMIPTNPTYGGIPETSSAHHIQMIQQPELSKEEIPMEEAPVVEKANGARKKRQGPKVPKSPKAKKPKRGPRVPKDENTPSVQRARVPKKTTEIVINGLDLDISSIPIPVCSCTGTPQQCYRWGSGGWQSACCTTGMSMYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIRRKFLSVQKPIGD 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3097g00003 297 Pfam GAGA binding protein-like family 5 285 IPR010409 -
Gabi3097g00003 297 PANTHER - 1 285 IPR010409 -
Gabi3097g00003 297 MobiDBLite consensus disorder prediction 138 155 - -
Gabi3097g00003 297 SMART GAGA_bind_2 1 285 IPR010409 -
Gabi3097g00003 297 MobiDBLite consensus disorder prediction 127 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3097g00003 Gabi-Chr3097 30199 32336 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3097g00003 5 285 BBR or BPC Transcription factor family AT2G01930 52.203 3.94e-98 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Gabi3097g00003 GAGA_bind 3.5e-107 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3097g00003 - - gmx:100800718 494.197