Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3096g00003 ATGCGCTTGAGCTGCAATGGCTGTCGTGTCCTCCGCAGAGGTTGCACCAACGATTGCCCCATTCGCCCTTGCCTCGATTGGATCAAATCCCCTGACTCACAGGCCAATGCCACCCTCTTCCTCGCCAAGTTCTACGGCCGCGCCGGCCTCCTCAACCTCCTCACCGCCGCTCCGCCGCAACCTCGACCCTCTATTTTCAAATCTTTGCTCTATGAAGCTTGCGGCCGGATTGTGAACCCGATTTTCGGCTCGACCGGATTGCTCTCGACCGGGAGATGGCACCTCTGCGAAGCCGCGGTTGAAGATGTTCTGATCGGCGCGCCGATACAGCAGGCTCCTTCTGAATCGTCTTTTGATATTCGCCACGTGTCAAAGATTGGGAAATCGTGCTGCTCTGATCGAGCTCGGAAGCCGAAGCAGAAAGTGGAGCCAGTTGTGTCCGAGCTGATGGTGACTCGTTCTGGAAGCAAGTTAGAAGGTTCGGTGAGTCGTGACTCGAGGAGGTTTGGGGAGAGTGAGCACATAAACGAAGCTGATAGCAATTTAGTTGAGAGTGTGGAGCCGGCTCGAGCTGATATTGAAGAACTTGAGCTGGAGTTGACTTTGGGATTGGGTCCAATGAATTAA 627 0.5455 MRLSCNGCRVLRRGCTNDCPIRPCLDWIKSPDSQANATLFLAKFYGRAGLLNLLTAAPPQPRPSIFKSLLYEACGRIVNPIFGSTGLLSTGRWHLCEAAVEDVLIGAPIQQAPSESSFDIRHVSKIGKSCCSDRARKPKQKVEPVVSELMVTRSGSKLEGSVSRDSRRFGESEHINEADSNLVESVEPARADIEELELELTLGLGPMN 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3096g00003 208 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 201 - -
Gabi3096g00003 208 Pfam Lateral organ boundaries (LOB) domain 4 101 IPR004883 -
Gabi3096g00003 208 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3096g00003 Gabi-Chr3096 96682 97417 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3096g00003 1 208 AS2 family AT3G02550 46.552 1.49e-63 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gabi3096g00003 LOB 5.7e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3096g00003 - - gmx:100802646 237.269