Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3096g00001 ATGAATCCAGCATCTAATAACCACATTACAGAACCCAGAGATCTGGGAATTTCAAGTGCCAATTCCAATGGAGTTCATTCAGCACAAAGGAAGGTTTTGTCTGAGTCAAAGTTTCAAAGTGTCTTGCATAGCCCAATTATAACAGAACCATCAGCTGCATTAATAGGTCATAAGCTCCCTGAGGTGTTTCAACTGAAACATGGAAGCTACGCTGATCTTCCTGCTGCAAAAATCTCAGAACTGATGACATCATCTTGTTTGGATAATGCTCCCACTCAATCGCTTCTGAGTGTTGTCAATGGTATCCTGGAAGAAAGTGTTGAGAGAAGAAATGGCGAAATACCCCATCGTGTGGCTTGCTTGTTGAGGAAAGTTGTCCAAGAGATTGAGCGGCGTATATCAACTCAAGCAGAACATTTACGAAAACAAAACAATCTTTTTAAGGCTCGTGAAGAAAAATATCAATCAAGAATCAGTGTACTTGAGGCTCTTGCATCTGGAACCGGGGAAGAGAGTGAGGTTGATGTTACAAGCCAGCTTCAGCAGCTAAAGACTGAGAAGATTAAAAAGGAAGAAAAGAAGAAGGAAGATGACAAAGATGTTATTAGACTTACTAAAGAGCTGGAAGACAAAAACATGGAAATTTCAACATTGAAGCAAGAACTAGAAACGTTGAAAAAAACATATGAAGTAAAATGCTCACAGTTGGAAGCAGAAGCAAAGGATGCTAAAGGAGAACTGAAACAGAAATCACAAGAAACTGAACAGATATTGGAACAATATAAAAATAAGGTTAAAGAGAAAGAGGCTTTTACTGAGTCAAAATATCAGAAGTGGAAAATGAAAGAGATCCAAATGCAAAAAGCTGTTAATTTCCAGCTTAGTTACCTACAGAAATTGAAAATGTCATGGGAATCCATTAAGCAAGACGTTATGAAAGAGAAAACGGTTTATGCTGAGGAATGTAATCGATTAGGTGTAAATCTTAAATCACTAGTAGATGCAGCTGAGAATTATCAAGCAGTTCTTTCAGAAAATCGAAAAATGTTCAATGAAATTCAAGAATTAAAAGGAAATATTAGAGTATATTGTCGACTCAGACCATTTCTTGCTGGACTAAAGGAAAAACAGTCTATTGTGGAACACATTGGTGAAACAGATTTGGTTGTGGCAAATCCCTCCAAACAAGGGAAAGAAGCCCTTAGAACATTTAAGTTTAACAAGGTCTTTGGTCCAACCTCAACTCAAGCTGAGGTGTACTCTGACATACAAGCCTTTATACGATCAGTACTCGATGGGTATAATGTATGTATATTTGCTTATGGCCAGACTGGTTCAGGGAAAACTTACACAATGAGTGGTCCAAATGGTGCAACAAACGAAAGTGTTGGTGTTAACTATCGAGCTCTGAATGAACTCTTCAGCATATCCACAAATAGAAAAAGTTCCATAGTCTATGACATTGGGGTTCAAATAATTGAGATATATAATGAACAAGTGCGGGATTTGTTAACAAGTGATGGTGCTCCAAAAAAACTTGGGATATTGAACCACTCTCAACCAAATGGTTTAGCAGTGCCTGATGCTAGCATGTATCCTGTCAAATCAACTGCAGATGTCATGAAACTAATGGACATTGGTCTTAAAAATAGAGCCAAGGGTTCCACTGCTATGAATGAAAGAAGTAGCCGTTCTCACAGTGTGGTCTCAATTCATGTTCGTGGAGTGGATAAGAAGTCTGGTTCTTCTCTTCAAGGTAATCTTCATTTGGTAGATTTGGCAGGAAGTGAAAGGGTAGACCGCTCTGAAGTAACTGGGGATAGACTTAAGGAAGCACAGCATATTAACAAATCACTATCTGCCCTTGGTGATGTCATTTTTGCACTTTCTCAAAAGAGTGCCCATGTACCATACAGAAACAGCAAGCTTACTCAACTTTTGCAATCATCTCTTGGTGGTCAAGCAAAGACACTCATGTTAGTCCAAATTAATTCAGACGTAAAGTCATTTTCTGAATCTCTGAGTACTTTGAAGTTTGCTGAGAGGGTTTCTGGAGTTGAGTTAGGAGCTGCACGAAGTACCAAAGAGGGCAGAGATGTCAGAGAATTGATGGAGCAGGTGGCTTCTCTCAAGGACACTATTTTGACAAAAGATGAGGAGATTGAGAGGCTACAATTACTTAAGAATCTGAAAAATGGTTATCCTGGTGGCAATTCTGAGAAGCTTGAAACTTCCCCCGATTGA 2244 0.3886 MNPASNNHITEPRDLGISSANSNGVHSAQRKVLSESKFQSVLHSPIITEPSAALIGHKLPEVFQLKHGSYADLPAAKISELMTSSCLDNAPTQSLLSVVNGILEESVERRNGEIPHRVACLLRKVVQEIERRISTQAEHLRKQNNLFKAREEKYQSRISVLEALASGTGEESEVDVTSQLQQLKTEKIKKEEKKKEDDKDVIRLTKELEDKNMEISTLKQELETLKKTYEVKCSQLEAEAKDAKGELKQKSQETEQILEQYKNKVKEKEAFTESKYQKWKMKEIQMQKAVNFQLSYLQKLKMSWESIKQDVMKEKTVYAEECNRLGVNLKSLVDAAENYQAVLSENRKMFNEIQELKGNIRVYCRLRPFLAGLKEKQSIVEHIGETDLVVANPSKQGKEALRTFKFNKVFGPTSTQAEVYSDIQAFIRSVLDGYNVCIFAYGQTGSGKTYTMSGPNGATNESVGVNYRALNELFSISTNRKSSIVYDIGVQIIEIYNEQVRDLLTSDGAPKKLGILNHSQPNGLAVPDASMYPVKSTADVMKLMDIGLKNRAKGSTAMNERSSRSHSVVSIHVRGVDKKSGSSLQGNLHLVDLAGSERVDRSEVTGDRLKEAQHINKSLSALGDVIFALSQKSAHVPYRNSKLTQLLQSSLGGQAKTLMLVQINSDVKSFSESLSTLKFAERVSGVELGAARSTKEGRDVRELMEQVASLKDTILTKDEEIERLQLLKNLKNGYPGGNSEKLETSPD 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3096g00001 747 PANTHER KINESIN-LIKE PROTEIN KLP-3 250 722 IPR027640 GO:0003777|GO:0007018
Gabi3096g00001 747 Coils Coil 700 720 - -
Gabi3096g00001 747 Coils Coil 180 264 - -
Gabi3096g00001 747 PRINTS Kinesin heavy chain signature 587 605 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3096g00001 747 PRINTS Kinesin heavy chain signature 433 454 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3096g00001 747 PRINTS Kinesin heavy chain signature 636 657 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3096g00001 747 PRINTS Kinesin heavy chain signature 556 573 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3096g00001 747 MobiDBLite consensus disorder prediction 1 22 - -
Gabi3096g00001 747 Pfam Kinesin motor domain 365 684 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3096g00001 747 SMART kinesin_4 357 694 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3096g00001 747 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 301 688 - -
Gabi3096g00001 747 Gene3D - 196 237 - -
Gabi3096g00001 747 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 359 724 IPR027417 -
Gabi3096g00001 747 ProSiteProfiles Kinesin motor domain profile. 359 686 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3096g00001 747 Gene3D Kinesin motor domain 301 688 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3096g00001 Gabi-Chr3096 17246 28672 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3096g00001 347 686 Calmodulin-binding Proteins AT5G65930 39.193 3.06e-67 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3096g00001 K10406 - mnt:21402880 948.347