Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3094g00016 ATGGGTGCTTTGGGAGAAGCTATGGAAAAACTTGCAAGAAAAAAGTACTCTGGGAAAAACATGACAAATGTGTGGTCCAGGTGGAGGACTACACTCACCGAAGCTGCAAATTTGTCTGGTTGGGAAGTCACCACTAGCAGCAATCAAGCTAAAGTAGCAAAGCTTATTCTTGAAGAGGTTTTAACAAAACTAGACAACACATTACTGTCTATTACGGAATTTCCAGTTGGATTAGAAACCCGTGTGGGAGAAGTGATTGGGTTACTTGAAAATCAATCAAGCAAAGTTTGTATGCTAGGGATATGGGGAATGGGTGGATCGGGTAAAACCACCACAGCCAAAGCCATTTACAATCAAATTCATCGCAAATTTGAGGGTACAAGTTTCATCGAAAATATTAGAGAAGTTTGCGAAAAAGATAGTAGAGGGTATATTGATTTACAAGAACAACTTATTTCAGATGTTCTGAAAACAAAAGTGAAGATACATAGTATTGCTATGGGGACAACTGTGATCGAGAGAAGACTTTGTGGAAAAAGGGCACTCATTGTACTTGATGATGTGAATGAGTTTGAGCAATTAAAAGCCCTATGTGGAAATCGTAAATGGATTGGTTCAGGTAGTGTGTTAATTGTTACAACCAGAGATGTGCGCCTACTTAATGTGCTTAAAGTTGACCATGTTCATAGAACAAAGGAAATGGACGAAAATGAGTCCCTTGAGCTTTTTAGTTGGCATGCTTTTAGAGAAGCAAGTCCAAGAGAAGACTTGATTGAACTCTCAAGAAACATAGTTGCATACTGTGGGGGTTTACCACTAGCACTTGAAGTCCTTGGATCTTATTTATATGAGAGGACAGAACAAGAATGGAGAAGTGTATTGTCAAAACTGGAGATAATTCCCAATGATCAAGTACAAGAGAAACTGAGAATAAGCTTTGATGGTCTAAGGGATGATATGGAAAAGGATATATTTCTTGACATATGTTGTTTCTTTATTGGTAAGGATAGAGACTATGTTACAGATATACTAAATGGTTGTGGGCTTCATGCTGATATTGGATTAACAGTCCTCATAGAGCGGAGCCTCATAAAAGTTGAAAAGAATAACAAGCTTGGAATACATGCTTTGCTACGTGACATGGGAAGAGAAATTGTTCGTGAAAGTTCAGCTAAAAATCCTGAGAAGCGTAGTCGACTGTGGTTTCAAGAGGATGTGCTTGATGTTTTGACAAAAAATACTGGAACAGAAACTGTTGAGGGATTGGCTTTGAAGATGCAAAGAACCGACAGGGTTTGCTTTAGTAGTAATGCTTTCAAGGAAATGAAGAGAATGCGACTTTTACAATTTGATCATGTTGAACTCAACGGGGATTATGGATATCTTTCCGAACAACTGAGATGGGTCAATTGGCAACGATTTCCCTTGGAATATATTCCTGATAACTTTTATCTGGGAAATCTAGTTGCCATTGAATTAAAACACAGTAATATTAAAAAAATTTGGAAGGAACCCAAGTTGCTGGGGAGGCTAAAAATCCTCAATCTCAGTCATTCCAGGTTCTTGACAAATACCCCTGACTTTTCAAAACTACCGAATCTAGAAAAGCTCATTCTCAAGGATTGTCCAAGTTTGATTGAGGTACACCAGTCCATTGGAGATCTAAGTAAACTTCTTCTGATCAATTTGAAGAACTGTACAAGCCTTACCAATCTCCCAAGGAGGATCTATGAGTTGAAATCTGTGAAAACTCTCATACTTTCTGGTTGTTCAAAGATTGACAAGTTAGAAGAAGATATAGTGCATATGGAATCCTTGACAACTCTAATTGCAAACAACACTGCTGTAAAACAGGTGCCCTTTTCGATTGTTAGATCCAAAAGTATTGGATATATATCCCTGTGTGGATATGAAGGATTAGTGCGTGATGTATTTCCTTCTCTCATATGGTCTTGGATGTCACCGACAATGAATCCCCTATCCCGTATTCCACCATTTGGGGGCATGTCATCATCTCTAGTTTCCATTGATGTACAGGATAATAATTTTGGTAATCTATCACCAATGCTTGGGAACCTTCCAAAACTTCGAAGTGTTTGGGTGCAATGCAGCTCGGAGTGTCAATTAACTCAAGAATTAAGAAGAATCCTAGATGACCTATATGATGTATATTTTGCTCAATTGGGAGCATCATCATATGCATCACAAAATTCAGATCTTTCATTGAGATCACTTTTAATTGGAATGGGAAGTTACCATATGGTCATCGATATTCTAGGCAAGAGCATATCACAGGAATTGACAACCAATCGTTCTAATGATGTTTTCCTTCCGGGTGACAATTGTCCTTCTTGGTTGGCCTATACATGTGCAGGACATTCTGTGGTTTTCCAAGTGCCTGAAGATGGTGATTGTCGCATGAAGGGAATGATTTTATGTGTGGTTTATTCATCAAAACCTGAAAACATGGCAGCCGAATGTCTTATTAGTGTTTTGATCATTAATTACACGAAGTGCACTATTCTGATACACAAGAGAGACACAGCTATGTCCTTTAATGATGAAGATTGGCAGGGTGTGATATCAAATCTAGAACCTGGTGACACTGTTGAGATTTTTGTAGCATTTGGGCATGGATTGACTGCTAAGAAGACTGCTGTCTACGTAATATATGGCCAGTCAATTACTGTGGAAGTTGAGCCTTCAATTAATGTGGAAATGGAGCCACCACCTGAATTGAACGCACAATTATCACCTAGTGTCGAAATGGAGCCAGCATCTGAATTGAACTCAAAGCCATCACCTAGTGTGGAAATGGAGCCAGCATCTGAATTGAACTCACAGCCATCACATAGTATGGAAATGGAGCCAGCATCTGAATTTAACTCACAGCTATCATATAGTGTGGAAATGGAGCCATCACCTGAGATGAAAACGGATCCATCACCTGAATTGAACTCACAGCCACCATATAGTGTGGAAATGGAACTATCACCTGAGATGAAAACGGAGCCATCACCAAAGCCAAACAAAAGTATCTTTGCAAGACTTACAAAGAGAATGGGAGAATGTTTATGCTTGAACCAGAATTGA 3093 0.3899 MGALGEAMEKLARKKYSGKNMTNVWSRWRTTLTEAANLSGWEVTTSSNQAKVAKLILEEVLTKLDNTLLSITEFPVGLETRVGEVIGLLENQSSKVCMLGIWGMGGSGKTTTAKAIYNQIHRKFEGTSFIENIREVCEKDSRGYIDLQEQLISDVLKTKVKIHSIAMGTTVIERRLCGKRALIVLDDVNEFEQLKALCGNRKWIGSGSVLIVTTRDVRLLNVLKVDHVHRTKEMDENESLELFSWHAFREASPREDLIELSRNIVAYCGGLPLALEVLGSYLYERTEQEWRSVLSKLEIIPNDQVQEKLRISFDGLRDDMEKDIFLDICCFFIGKDRDYVTDILNGCGLHADIGLTVLIERSLIKVEKNNKLGIHALLRDMGREIVRESSAKNPEKRSRLWFQEDVLDVLTKNTGTETVEGLALKMQRTDRVCFSSNAFKEMKRMRLLQFDHVELNGDYGYLSEQLRWVNWQRFPLEYIPDNFYLGNLVAIELKHSNIKKIWKEPKLLGRLKILNLSHSRFLTNTPDFSKLPNLEKLILKDCPSLIEVHQSIGDLSKLLLINLKNCTSLTNLPRRIYELKSVKTLILSGCSKIDKLEEDIVHMESLTTLIANNTAVKQVPFSIVRSKSIGYISLCGYEGLVRDVFPSLIWSWMSPTMNPLSRIPPFGGMSSSLVSIDVQDNNFGNLSPMLGNLPKLRSVWVQCSSECQLTQELRRILDDLYDVYFAQLGASSYASQNSDLSLRSLLIGMGSYHMVIDILGKSISQELTTNRSNDVFLPGDNCPSWLAYTCAGHSVVFQVPEDGDCRMKGMILCVVYSSKPENMAAECLISVLIINYTKCTILIHKRDTAMSFNDEDWQGVISNLEPGDTVEIFVAFGHGLTAKKTAVYVIYGQSITVEVEPSINVEMEPPPELNAQLSPSVEMEPASELNSKPSPSVEMEPASELNSQPSHSMEMEPASEFNSQLSYSVEMEPSPEMKTDPSPELNSQPPYSVEMELSPEMKTEPSPKPNKSIFARLTKRMGECLCLNQN 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3094g00016 1030 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 607 IPR044974 GO:0006952
Gabi3094g00016 1030 Gene3D - 1 61 IPR035897 -
Gabi3094g00016 1030 Gene3D - 233 317 IPR042197 -
Gabi3094g00016 1030 Pfam NB-ARC domain 79 298 IPR002182 GO:0043531
Gabi3094g00016 1030 MobiDBLite consensus disorder prediction 907 1011 - -
Gabi3094g00016 1030 Gene3D - 62 229 IPR027417 -
Gabi3094g00016 1030 Gene3D Ribonuclease Inhibitor 434 743 IPR032675 -
Gabi3094g00016 1030 SUPERFAMILY L domain-like 433 702 - -
Gabi3094g00016 1030 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 328 IPR027417 -
Gabi3094g00016 1030 SUPERFAMILY "Winged helix" DNA-binding domain 304 410 IPR036390 -
Gabi3094g00016 1030 MobiDBLite consensus disorder prediction 920 970 - -
Gabi3094g00016 1030 PRINTS Disease resistance protein signature 577 593 - -
Gabi3094g00016 1030 PRINTS Disease resistance protein signature 98 113 - -
Gabi3094g00016 1030 PRINTS Disease resistance protein signature 175 189 - -
Gabi3094g00016 1030 PRINTS Disease resistance protein signature 268 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3094g00016 Gabi-Chr3094 377584 387799 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3094g00016 27 623 WRKY Transcription Factor Family AT4G12020 31.656 7.65e-79 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3094g00016 - - gmx:100798685 1251.11