Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3094g00014 ATGGAGTCCATGTCTTCTTCATCCTTCAATGGTCGATGGATCTACGACGTGTTCTTGAGTTTCAGAGGGAAAGACACGCGTAACAGCTTCGTTTCTCATCTCCACGCTTCCCTCTCAAATGCTGGAATCAACACTTTCCTTGACGATGAGAAGCTTGAGAAGGGAACGGAGTTAGGACCAGAACTACTGCGAGCAATAGAAAGGTCTCAAATCTCTATCGTTGTTTTCTCCGAAACCTACACTGAATCTAGTTGGTGTCTTAATGAGCTCGTAAAAATAATGGAATGCCACAGAACTTATGGCCAGGTTGTTCTGCCCGTGTTTTACGGTGTTGAACCAACGCAAATACGTTATCAAATGGGTGCTTTGGGAGAAGCTATGGAAAAACTTGCAAGAAAAAAGTACTCTGGGAAAAACATGACAAATGTGTGGTCCAGGTGGAGGACTACACTCACCGAAGCTGCAAATTTGTCTGGTTGGGAAGTCACCACTAGCAGCAATCAAGCTAAAGTAGCAAAGCTTATTCTTGAAGAGGTTTTAACAAAACTAGACAACACATTACTGTCTATTACGGAATTTCCAGTTGGATTAGAAACCCGTGTGGGAGAAGTGATTGGGTTACTTGAAAATCAATCAAGCAAAGTTTGTATGCTAGGGATATGGGGAATGGGTGGATCGGGTAAAACCACCACAGCCAAAGCCATTTACAATCAAATTCATCGCAAATTTGAGGGTACAAGTTTCATCGAAAATATTAGAGAAGTTTGCGAAAAAGATAGTAGAGGGTATATTGATTTACAAGAACAACTTATTTCAGATGTTCTGAAAACAAAAGTGAAGATACATAGTATTGCTATGGGGACAACTGTGATCGAGAGAAGACTTTGTGGAAAAAGGGCACTCATTGTACTTGATGATGTGAATGAGTTTGAGCAATTAAAAGCCCTATGTGGAAATCGTAAATGGATTGGTTCAGGTAGTGTGTTAATTGTTACAACCAGAGATGTGCGCCTACTTAATGTGCTTAAAGTTGACCATGTTCATAGAACAAAGGAAATGGACGAAAATGAGTCCCTTGAGCTTTTTAGTTGGCATGCTTTTAGAGAAGCAAGTCCAAGAGAAGACTTGATTGAACTCTCAAGAAACATAGTTGCATACTGTGGGGGTTTACCACTAGCACTTGAAGTCCTTGGATCTTATTTATATGAGAGGACAGAACAAGAATGGAGAAGTGTATTGTCAAAACTGGAGATAATTCCCAATGATCAAGTACAAGAGAAACTGAGAATAAGCTTTGATGGTCTAAGGGATGATATGGAAAAGGATATATTTCTTGACATATGTTGTTTCTTTATTGGTAAGGATAGAGACTATGTTACAGATATACTAAATGGTTGTGGGCTTCATGCTGATATTGGATTAACAGTCCTCATAGAGCGGAGCCTCATAAAAGTTGAAAAGAATAACAAGCTTGGAATACATGCTTTGCTACGTGACATGGGAAGAGAAATTGTTCGTGAAAGTTCAGCTAAAAATCCTGAGAAGCGTAGTCGACTGTGGTTTCAAGAGGATGTGCTTGATGTTTTGACAAAAAATACTGGAACAGAAACTGTTGAGGGATTGGCTTTGAAGATGCAAAGAACCGACAGGGTTTGCTTTAGTAGTAATGCTTTCAAGGAAATGAAGAGAATGCGACTTTTACAATTTGATCATGTTGAACTCAACGGGGATTATGGATATCTTTCCGAACAACTGAGATGGGTCAATTGGCAACGATTTCCCTTGGAATATATTCCTGATAACTTTTATCTGGGAAATCTAGTTGCCATTGAATTAAAACACAGTAATATTAAAAAAATTTGGAAGGAACCCAAGTTGCTGGGGAGGCTAAAAATCCTCAATCTCAGTCATTCCAGGTTCTTGACAAATACCCCTGACTTTTCAAAACTACCGAATCTAGAAAAGCTCATTCTCAAGGATTGTCCAAGTTTGATTGAGGTACACCAGTCCATTGGAGATCTAAGTAAACTTCTTCTGATCAATTTGAAGAACTGTACAAGCCTTACCAATCTCCCAAGGAGGATCTATGAGTTGAAATCTGTGAAAACTCTCATACTTTCTGGTTGTTCAAAGATTGACAAGTTAGAAGAAGATATAGTGCATATGGAATCCTTGACAACTCTAATTGCAAACAACACTGCTGTAAAACAGGATAATAATTTTGGTAATCTATCACCAATGCTTGGGAACCTTCCAAAACTTCGAAGTGTTTGGGTGCAATGCAGCTCGGAGTGTCAATTAACTCAAGAATTAAGAAGAATCCTAGATGACCTATATGATGTATATTTTGCTCAATTGGGAGCATCATCATATGCATCACAAAATTCAGATCTTTCATTGAGATCACTTTTAATTGGAATGGGAAGTTACCATATGGTCATCGATATTCTAGGCAAGAGCATATCACAGGAATTGACAACCAATCGTTCTAATGATGTTTTCCTTCCGGGTGACAATTGTCCTTCTTGGTTGGCCTATACATGTGCAGGACATTCTGTGGTTTTCCAAGTGCCTGAAGATGGTGATTGTCGCATGAAGGGAATGATTTTATGTGTGGTTTATTCATCAAAACCTGAAAACATGGCAGCCGAATGTCTTATTAGTGTTTTGATCATTAATTACACGAAGTGCACTATTCTGATACACAAGAGAGACACAGCTATGTCCTTTAATGATGAAGATTGGCAGGGTGTGATATCAAATCTAGAACCTGGTGACACTGTTGAGATTTTTGTAGCATTTGGGCATGGATTGACTGCTAAGAAGACTGCTGTCTACGTAATATATGGCCAGTCAATTACTGTGGAAGTTGAGCCTTCAATTAATGTGGAAATGGAGCCACCACCTGAATTGAACGCACAATTATCACCTAGTGTCGAAATGGAGCCAGCATCTGAATTGAACTCAAAGCCATCACCTAGTGTGGAAATGGAGCCAGCATCTGAATTGAACTCACAGCCATCACATAGTATGGAAATGGAGCCAGCATCTGAATTTAACTCACAGCTATCATATAGTGTGGAAATGGAGCCATCACCTGAGATGAAAACGGATCCATCACCTGAATTGAACTCACAGCCACCATATAGTGTGGAAATGGAACTATCACCTGAGATGAAAACGGAGCCATCACCAAAGCCAAACAAAAGTATCTTTGCAAGACTTACAAAGAGAATGGGAGAATGTTTATGCTTGAACCAGAATTGA 3267 0.3939 MESMSSSSFNGRWIYDVFLSFRGKDTRNSFVSHLHASLSNAGINTFLDDEKLEKGTELGPELLRAIERSQISIVVFSETYTESSWCLNELVKIMECHRTYGQVVLPVFYGVEPTQIRYQMGALGEAMEKLARKKYSGKNMTNVWSRWRTTLTEAANLSGWEVTTSSNQAKVAKLILEEVLTKLDNTLLSITEFPVGLETRVGEVIGLLENQSSKVCMLGIWGMGGSGKTTTAKAIYNQIHRKFEGTSFIENIREVCEKDSRGYIDLQEQLISDVLKTKVKIHSIAMGTTVIERRLCGKRALIVLDDVNEFEQLKALCGNRKWIGSGSVLIVTTRDVRLLNVLKVDHVHRTKEMDENESLELFSWHAFREASPREDLIELSRNIVAYCGGLPLALEVLGSYLYERTEQEWRSVLSKLEIIPNDQVQEKLRISFDGLRDDMEKDIFLDICCFFIGKDRDYVTDILNGCGLHADIGLTVLIERSLIKVEKNNKLGIHALLRDMGREIVRESSAKNPEKRSRLWFQEDVLDVLTKNTGTETVEGLALKMQRTDRVCFSSNAFKEMKRMRLLQFDHVELNGDYGYLSEQLRWVNWQRFPLEYIPDNFYLGNLVAIELKHSNIKKIWKEPKLLGRLKILNLSHSRFLTNTPDFSKLPNLEKLILKDCPSLIEVHQSIGDLSKLLLINLKNCTSLTNLPRRIYELKSVKTLILSGCSKIDKLEEDIVHMESLTTLIANNTAVKQDNNFGNLSPMLGNLPKLRSVWVQCSSECQLTQELRRILDDLYDVYFAQLGASSYASQNSDLSLRSLLIGMGSYHMVIDILGKSISQELTTNRSNDVFLPGDNCPSWLAYTCAGHSVVFQVPEDGDCRMKGMILCVVYSSKPENMAAECLISVLIINYTKCTILIHKRDTAMSFNDEDWQGVISNLEPGDTVEIFVAFGHGLTAKKTAVYVIYGQSITVEVEPSINVEMEPPPELNAQLSPSVEMEPASELNSKPSPSVEMEPASELNSQPSHSMEMEPASEFNSQLSYSVEMEPSPEMKTDPSPELNSQPPYSVEMELSPEMKTEPSPKPNKSIFARLTKRMGECLCLNQN 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3094g00014 1088 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 757 IPR044974 GO:0006952
Gabi3094g00014 1088 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 185 - -
Gabi3094g00014 1088 MobiDBLite consensus disorder prediction 965 1069 - -
Gabi3094g00014 1088 Gene3D Ribonuclease Inhibitor 530 801 IPR032675 -
Gabi3094g00014 1088 SUPERFAMILY L domain-like 543 767 - -
Gabi3094g00014 1088 SUPERFAMILY "Winged helix" DNA-binding domain 423 529 IPR036390 -
Gabi3094g00014 1088 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 160 IPR035897 -
Gabi3094g00014 1088 Gene3D - 352 436 IPR042197 -
Gabi3094g00014 1088 Pfam TIR domain 15 189 IPR000157 GO:0007165
Gabi3094g00014 1088 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 447 IPR027417 -
Gabi3094g00014 1088 ProSiteProfiles TIR domain profile. 13 187 IPR000157 GO:0007165
Gabi3094g00014 1088 SMART till_3 14 157 IPR000157 GO:0007165
Gabi3094g00014 1088 PRINTS Disease resistance protein signature 294 308 - -
Gabi3094g00014 1088 PRINTS Disease resistance protein signature 696 712 - -
Gabi3094g00014 1088 PRINTS Disease resistance protein signature 387 401 - -
Gabi3094g00014 1088 PRINTS Disease resistance protein signature 217 232 - -
Gabi3094g00014 1088 MobiDBLite consensus disorder prediction 978 1028 - -
Gabi3094g00014 1088 Gene3D - 181 348 IPR027417 -
Gabi3094g00014 1088 Pfam NB-ARC domain 198 417 IPR002182 GO:0043531
Gabi3094g00014 1088 Gene3D - 12 180 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3094g00014 Gabi-Chr3094 377584 387899 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3094g00014 627 737 WRKY Transcription Factor Family AT4G12020 35.135 6.27e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3094g00014 - - gmx:100815297 1262.67