LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gabi3094g00010	ATGGAATTTTCAAGAGAGAGAAAAAGAGAAATGAGCCCAAACGGTAGTTCCATCTCATCGGTGGCGAAACAAGCGGAGCAGCTGAGAATAGACGGCAACTCTTACTTCAAAAAAGACCGTTACGGCGCTGCCATCGATGCTTACACCGAGGCTATTACGCTGTGCCCTGATGTTGCGGTTTATTGGACGAATCGTGCTCTGTGCCATCTCAAACGCAATGATTGGGAGAGATTAGAGGAAGACTCTCGAAGAGCGATTCAGCTTGACAGCAATTCGGTTAAGGCACACTATATGTTGGGACTTGCATTACTACAAAAACAAGAATATGCCAAGGGAATCAGAGAATTGGAGAAGGCTTTGGATCTTGGGAGAGGTGCCAATCCCAAGTCCTATATGGTAGAACAAATATGGCAAGAGCTTGCAAATGCAAAATACCTAGAGTGGGAACGTTCGTCGTCCAAACGATCATGGGAATTGCAGAGCTTGAAAGAAACATGTGAGTCTGCGTTAAAGGAAAAACATTTTCTCGATTCCTCCCAAATGGAAGGATTTGTAGATGATGCCACTACTTACCATTTGGAACAATTAGAAGCTTTAGAAAGAGTCTTCAGTAAAGCTGCAGAGGATGACACACCTACTGAGGTGCCAGATTATCTATGCTGTAGAATCACACTTGATATTTTTCGTGATCCTGTAATCACTCCAAGTGGACTTACATACGAGAGAGCAGTGATCATTGAGCATCTTGAAAAGGTGGGTAATTTTGACCCAGTTACGCGGGAACCACTTGCTCCATCACAGCTAGCACCAAACTTGGCCATTAAGGAAGCGGTTCAGGCATTTTTGGAAAAACATGGGTGGGCCTACAAGGTAGATTAA	879	0.4414	MEFSRERKREMSPNGSSISSVAKQAEQLRIDGNSYFKKDRYGAAIDAYTEAITLCPDVAVYWTNRALCHLKRNDWERLEEDSRRAIQLDSNSVKAHYMLGLALLQKQEYAKGIRELEKALDLGRGANPKSYMVEQIWQELANAKYLEWERSSSKRSWELQSLKETCESALKEKHFLDSSQMEGFVDDATTYHLEQLEALERVFSKAAEDDTPTEVPDYLCCRITLDIFRDPVITPSGLTYERAVIIEHLEKVGNFDPVTREPLAPSQLAPNLAIKEAVQAFLEKHGWAYKVD	292

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gabi3094g00010	292	PANTHER	E3 UBIQUITIN-PROTEIN LIGASE CHIP	13	290	IPR045200	GO:0000209\|GO:0061630
	Gabi3094g00010	292	MobiDBLite	consensus disorder prediction	1	22	-	-
	Gabi3094g00010	292	Pfam	Tetratricopeptide repeat	84	124	-	-
	Gabi3094g00010	292	SMART	tpr_5	93	126	IPR019734	GO:0005515
	Gabi3094g00010	292	SMART	tpr_5	25	58	IPR019734	GO:0005515
	Gabi3094g00010	292	SMART	tpr_5	59	92	IPR019734	GO:0005515
	Gabi3094g00010	292	SUPERFAMILY	RING/U-box	207	289	-	-
	Gabi3094g00010	292	SUPERFAMILY	TPR-like	23	143	IPR011990	GO:0005515
	Gabi3094g00010	292	Gene3D	Tetratricopeptide repeat domain	17	182	IPR011990	GO:0005515
	Gabi3094g00010	292	ProSiteProfiles	U-box domain profile.	214	288	IPR003613	GO:0004842\|GO:0016567

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gabi3094g00010	18	291	U-box Gene Family	AT3G07370	67.636	8.49e-142	399

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gabi3094g00010	K09561		-	gmx:100796519	480.33

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