Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3093g00001 ATGGAATGGATTATAGGACTTTGGGTTCTGATGGGTATCCTTTTATGTTGGTGGTTTCTTTGTGTGAAGGAGGAGAATAAGGTAAAGAAGAAGAAGAATAAGAAGAAGGGAAAAGTTCCAAAAGGGAACACAGGTTGGCCTTTCATTGGAGAGACCCTTGATTTCATTGCTTGTGGCTACACCTCTAACCCTGTCACCTTCATGGAAAAGCGCAAGTCCCTGTATGGTAATGTGTTTAAGACGAGCATTTTGGGAACTGGTGTGATTGTGTCCACAGACGCAGAGGTGAACAAGGTTGTTCTGCACAACCAGGGGAACATCTTCGTACCTGCTTATCCAAAATCAGTTAGAGAACTAATGGGAGAACACTCTATACTCCAAATGAACGGGAACATGCATAGGAAAGTTCATGCACTCCTTGGATTGTTCCTCAGATCCCCACAACTCAAAACTCGAATCACCAGAGATATTCAGCACTCTGTCAAAGAATGCTTCGCTACTTGGACCCACCAACCAATATACATTCAAGATCAAGTCAAAAAGATTACATTTACTGTTTTGGTTAAAGTTCTGATGGGGATTGGCCCCGGGGAAGATTTAGACTTCTTGAAAAGAGAATTTGAAGAGTTCATCAAAGGGTTGATATGCGTACCACTCAAGTTTCCAGGAACAAGACTATATAAATCCTTAAAGGCTAAAGAAAGAATGATGAAGATAGTAAAGAGGATAATAGAGAAAAGGAATAATATTATGTATAATAATAAGGATTCAGTGAAGGATGGTGCAGTGAATGATGTGGTGGATGTGCTCTTACGGGATAGGGGTGACTCTGACTCTATCTCTAACCTGTCATTGGAAAATATCAGCGAAAACATAATTGAGATGATGATCCCTGGGGAGGAGACTCTCCCAACGGCTATGACCATGGCTGTCAAGTTTCTCAGTGACTATCCTGTTGCTCTGTCCAAATTAGTGGAGGAGAACATGGAATTGAAGAGGCAGAAGAATTGTTCAGATGATTATGCGTGGACTGACTACGTGTCACTGCCGTTTACTCAAAATGTTATCAGCGAAACTCTTAGAATGGCAAATATTGTCAATGCCATTTGGAGAAAAGCAGTCAAAGACGTAGATATTAAAGGGTACCTAATTCCTAAGGACTGGTGTGTTGTGGCATCTCTTACTTCTGTTCATTTGGATGGCATGAACTATGAAAACCCTTTTGAATTTGATCCATGGAGATGGGAGAAAATTGGAGCTGGGGCTAGTAACAACTACTTTACGCCATTCGGTGGTGGACAGAGACTGTGCCCTGGGATAGAACTCTCCAGGCTTGAACTCTCTATTTTCCTTCATCATTTGGTTACTACTTACAGATGGGTTGCTGAGAAGGATGAAATTATCTACTTTCCAACAGTCAAGATGAAGAGGAAGCTCCCAATTAGTGTGACAGCCATTAACAACTGA 1467 0.4145 MEWIIGLWVLMGILLCWWFLCVKEENKVKKKKNKKKGKVPKGNTGWPFIGETLDFIACGYTSNPVTFMEKRKSLYGNVFKTSILGTGVIVSTDAEVNKVVLHNQGNIFVPAYPKSVRELMGEHSILQMNGNMHRKVHALLGLFLRSPQLKTRITRDIQHSVKECFATWTHQPIYIQDQVKKITFTVLVKVLMGIGPGEDLDFLKREFEEFIKGLICVPLKFPGTRLYKSLKAKERMMKIVKRIIEKRNNIMYNNKDSVKDGAVNDVVDVLLRDRGDSDSISNLSLENISENIIEMMIPGEETLPTAMTMAVKFLSDYPVALSKLVEENMELKRQKNCSDDYAWTDYVSLPFTQNVISETLRMANIVNAIWRKAVKDVDIKGYLIPKDWCVVASLTSVHLDGMNYENPFEFDPWRWEKIGAGASNNYFTPFGGGQRLCPGIELSRLELSIFLHHLVTTYRWVAEKDEIIYFPTVKMKRKLPISVTAINN 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3093g00001 488 SUPERFAMILY Cytochrome P450 35 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3093g00001 488 CDD CYP90-like 71 485 - -
Gabi3093g00001 488 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 29 486 - -
Gabi3093g00001 488 Pfam Cytochrome P450 40 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3093g00001 488 Gene3D Cytochrome P450 27 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3093g00001 488 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3093g00001 488 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3093g00001 488 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3093g00001 488 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3093g00001 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Gabi3093g00001 488 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3093g00001 488 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3093g00001 488 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3093g00001 488 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3093g00001 488 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3093g00001 488 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3093g00001 488 PANTHER CYTOCHROME P450 26 36 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3093g00001 Gabi-Chr3093 15274 22862 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3093g00001 39 381 Cytochrome P450 AT4G36380 65.507 1.12e-163 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3093g00001 K12637 - gmx:100812489 809.29