Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3092g00037 ATGAGTTCAGGCAGCACGGAAAAGCAGAAGGACAAGGAGAAGGCGAGGGTGAGTCGCACGTCGTTGATACTGTGGCACGCACATCAAAACGACGCCGCGGCGGTGCGGAAGCTCCTGCAGGAGGATCCGTCGCTGGTGAAGGCTGGAGATTATGACAACCGTACGCCGCTCCACGTGGCCTCCCTACACGGCTGGATCGACGTCGCCAAATGCTTGATTGAATTCGGCGCTGATGTCAACGCGCAGGATCGTTGGAAAAACACTCCTCTGGCTGATGCAGAGGGAGCTAAAAAGACTGAAGTGATCGAGCTTTTGAAATCGCATGGAGGCTTGTCTTATGGCCAAAATGGAAGCCATTTTGAACCGAAGCCTGTTCCGCCGCCGTTGCCGAACAAGTGTGATTGGGAAGTAGAACCTACTGAGTTGGACTTCTCTAATTCAGCGCGTATTGGAAAGGGATCTTTTGGTGAGATTTTAAAAGCCCATTGGCGTGGAACACCAGTTGCTGTCAAACGCATTCTTCCATCTCTTTCAGAAGATAGAATGGTGATTCAGGACTTCAGGCATGAGGTCAATTTGCTAGTGAAGCTTCGACACCCCAACATAGTTCAGTTTCTTGGAGCTGTTACTGACAGGAAGCCCCTTATGTTAATTACTGAGTATCTAAGAGGGGGTGATCTTCATCAATACCTAAAAGAAAAAGGTTCACTTAGTCCTTCAGCAGCTATAAACTTTTCGATGGATATTGCTAGAGGAATGGCTTATCTTCACAATGAGCCAAATGTTATTATTCATCGAGACCTAAAGCCAAGGAATGTTCTTTTAGTCAATTCTAGTGCTGACCATTTAAAAGTTGGAGATTTTGGATTGAGTAAGCTTATCACAGTCCAGAGTTCTCATGATGTATACAAGATGACTGGTGAAACTGGGAGCTACCGCTATATGGCTCCTGAAGTTTTCAAACACCGGAGATATGATAAGAAGGTTGATGTGTACTCCTTTGCAATGATTTTGTATGAGATGCTTGAAGGTGAACCACCTTTTGCAAGTTATGAACCTTATGATGGAGCAAAACACGCAGCTGAAGGATTCAGGCCTAGTTTTCGGGCAAAGGGTTACATCCCTGAATTGCAAGAGTTAACGGAGCAGTGTTGGGCTGCTGACATGAATCAAAGACCTTCCTTCATAGAGATCCTTAAACGGCTTGAAAAGATCAAGGAAAATTTACCCTCAGATCATCACTGGCACTTGTTCACTTCATAA 1263 0.4561 MSSGSTEKQKDKEKARVSRTSLILWHAHQNDAAAVRKLLQEDPSLVKAGDYDNRTPLHVASLHGWIDVAKCLIEFGADVNAQDRWKNTPLADAEGAKKTEVIELLKSHGGLSYGQNGSHFEPKPVPPPLPNKCDWEVEPTELDFSNSARIGKGSFGEILKAHWRGTPVAVKRILPSLSEDRMVIQDFRHEVNLLVKLRHPNIVQFLGAVTDRKPLMLITEYLRGGDLHQYLKEKGSLSPSAAINFSMDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLITVQSSHDVYKMTGETGSYRYMAPEVFKHRRYDKKVDVYSFAMILYEMLEGEPPFASYEPYDGAKHAAEGFRPSFRAKGYIPELQELTEQCWAADMNQRPSFIEILKRLEKIKENLPSDHHWHLFTS 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3092g00037 420 ProSitePatterns Protein kinases ATP-binding region signature. 150 171 IPR017441 GO:0005524
Gabi3092g00037 420 Pfam Ankyrin repeats (3 copies) 19 83 IPR002110 GO:0005515
Gabi3092g00037 420 SUPERFAMILY Ankyrin repeat 23 110 IPR036770 -
Gabi3092g00037 420 PRINTS Tyrosine kinase catalytic domain signature 219 232 IPR001245 GO:0004672|GO:0006468
Gabi3092g00037 420 PRINTS Tyrosine kinase catalytic domain signature 373 395 IPR001245 GO:0004672|GO:0006468
Gabi3092g00037 420 PRINTS Tyrosine kinase catalytic domain signature 257 275 IPR001245 GO:0004672|GO:0006468
Gabi3092g00037 420 PIRSF ILK 1 420 - -
Gabi3092g00037 420 SMART serkin_6 144 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3092g00037 420 Gene3D Transferase(Phosphotransferase) domain 1 224 416 - -
Gabi3092g00037 420 Gene3D - 2 118 IPR036770 -
Gabi3092g00037 420 SMART ANK_2a 52 81 IPR002110 GO:0005515
Gabi3092g00037 420 Pfam Protein tyrosine and serine/threonine kinase 147 402 IPR001245 GO:0004672|GO:0006468
Gabi3092g00037 420 SUPERFAMILY Protein kinase-like (PK-like) 135 415 IPR011009 -
Gabi3092g00037 420 ProSiteProfiles Ankyrin repeat region circular profile. 52 84 - -
Gabi3092g00037 420 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Gabi3092g00037 420 ProSiteProfiles Protein kinase domain profile. 144 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3092g00037 420 CDD STKc_MAP3K-like 150 402 - -
Gabi3092g00037 420 FunFam serine/threonine-protein kinase STY46-like 137 223 - -
Gabi3092g00037 420 Gene3D Phosphorylase Kinase; domain 1 136 223 - -
Gabi3092g00037 420 ProSiteProfiles Ankyrin repeat profile. 52 84 IPR002110 GO:0005515
Gabi3092g00037 420 FunFam Integrin-linked protein kinase family 223 418 - -
Gabi3092g00037 420 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 94 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3092g00037 Gabi-Chr3092 430269 436097 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3092g00037 10 420 MAP Kinase Kinase Kinase AT1G14000 86.131 0.0 733
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Gabi3092g00037 PK_Tyr_Ser-Thr 1.5e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3092g00037 - - gmx:100793237 785.023