Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3092g00004 ATGGAGAGCAAAAGTCAACTACAAGTTTCAAATTCAGGTCAACAGAGTGGAGGATCCACCTTTTTAGAAACTTGTTTCAATGGACTCAACTCCTTATTAGGTGTTGGGATACTCTCAATTTCGTATGCAGTTTCTCAAGGAGGGTGGTTGAGTTTTATACTGCTATTTATTTTTGCTATGATGTGCTGGTACACAGCGTTACTTCTGCAAAGGTGTATGGATGGAAATCCACAAATAAAATCCTACCCTGATATAGGTCAGGTAGCATTTGGGTACAAAGGAAGAGCTGTGGTAGCCAGTATAATATATATGGAGCTGTTTTTAATTGCCGTGGAGCTTCTGATATTAGAAGGTGACAATTTGGAGAAGTTGTTTCCAAGCGTGAACTTCACAATTGCAGGCCTTAGAATTGGAGGTAAAAGAGGTTTTATCATGCTTTCTGCTTTGGTAATATTACCAACAACTTGGTTGAGAAGCTTGGGAGTTTTGGCCTACATTTCTGTTGGTGGGGTACTGGCTTCTATTATTTTACTTGGTTGTGTTGTGTGGGTGGGTGAAGTTGATAGTGTGGGGTTTCATGAAAGAGGACACTTTGTAAATTGGGGTGGAATGCCTACTGCTTTGAGCATTTTTTCGTTCTGCTTTTGTGTGCATGCAGTACTTCCCACACTAATCAATTCTATGAAAGATAGAAGTCAGTCTTTCAAGGTTATGCTGGTTTGCTTTGTGGCAGGCACCATAGTCTATGGATCCATCGCTATTGTAGGCTACATGATGTTCGGAGAATGTTTGATGTCTCAAATAACGTTAAATCTACCGACAGGAAAAAAAAGTACAAAAATAGCAATTTATACTGCAATAATCTATCCTTTGACTAGGTATGCTGTTATAATCACCCCAATAGCCAATGCTATTGAGGGCAAATCGCTTCTCTGCAAGAGCAGGCCTATTGCCATCCTCATTAGAACCATCATCGTGGTCAGCACTGTGCTTATGGCGTTATTCATTCCCTTTTTTGGTTACATTATGGCGCTTATTGGTGCATTCTTGGATGTGGCAATCTCATTGTTGTTCCCATGCCTCTGCTACCTAAAGATAAACAAAGATGCTCGGCGATTTGGGTTTGAGCTGATCGTTATCGTAGGAATTCTGCTAATAGGATCATTCATTGGGATACTGGGTACCTACATCTCTCTGAGGCAGATAGTAAATCAGTTCAAGCTTTAA 1227 0.4042 MESKSQLQVSNSGQQSGGSTFLETCFNGLNSLLGVGILSISYAVSQGGWLSFILLFIFAMMCWYTALLLQRCMDGNPQIKSYPDIGQVAFGYKGRAVVASIIYMELFLIAVELLILEGDNLEKLFPSVNFTIAGLRIGGKRGFIMLSALVILPTTWLRSLGVLAYISVGGVLASIILLGCVVWVGEVDSVGFHERGHFVNWGGMPTALSIFSFCFCVHAVLPTLINSMKDRSQSFKVMLVCFVAGTIVYGSIAIVGYMMFGECLMSQITLNLPTGKKSTKIAIYTAIIYPLTRYAVIITPIANAIEGKSLLCKSRPIAILIRTIIVVSTVLMALFIPFFGYIMALIGAFLDVAISLLFPCLCYLKINKDARRFGFELIVIVGILLIGSFIGILGTYISLRQIVNQFKL 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3092g00004 408 PANTHER OS05G0424000 PROTEIN-RELATED 27 387 - -
Gabi3092g00004 408 Pfam Transmembrane amino acid transporter protein 18 371 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3092g00004 Gabi-Chr3092 59003 60751 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3092g00004 2 403 Amino Acid or Auxin Permease AAAP Family AT3G28960 46.535 1.01e-137 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3092g00004 K15015 - gmx:100812006 583.563