Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3092g00002 ATGGAGAGCAAAAGTCAACTACAAGTTTCAAATTCAGGTCAACAGAGTGGAGGATCCACCTTTTTAGAAACTTGTTTCAATGGACTCAACTCCTTATTAGGTGTTGGGATACTCTCAATTTCGTATGCAGTTTCTCAAGGAGGGTGGTTGAGTTTTATACTGCTATTTATTTTTGCTATGATGTGCTGGTACACAGCGTTACTTCTGCAAAGGTGTATGGATGGAAATCCACAAATAAAATCCTACCCTGATATAGGTCAGGTAGCATTTGGGTACAAAGGAAGAGCTGTGGTAGCCAGTATAATATATATGGAGCTGTTTTTAATTGCCGTGGAGCTTCTGATATTAGAAGGTGACAATTTGGAGAAGTTGTTTCCAAGCGTGAACTTCACAATTGCAGGCCTTAGAATTGGAGGTAAAAGAGGTTTTATCATGCTTTCTGCTTTGGTAATATTACCAACAACTTGGTTGAGAAGCTTGGGAGTTTTGGCCTACATTTCTGTTGGTGGGGTACTGGCTTCTATTATTTTACTTGGTTGTGTTGTGTGGGTGGGTGAAGTTGATAGTGTGGGGTTTCATGAAAGAGGACACTTTGTAAATTGGGGTGGAATGCCTACTGCTTTGAGCATTTTTTCGTTCTGCTTTTGTGTGCATGCAGTACTTCCCACACTAATCAATTCTATGAAAGATAGAAGTCAGTCTTTCAAGGTTATGCTGGTTTGCTTTGTGGCAGGCACCATAGTCTATGGATCCATCGCTATTGTAGGCTACATGATGTTCGGAGAATGTTTGATGTCTCAAATAACGTTAAATCTACCGACAGGAAAAAAAAGTACAAAAATAGCAATTTATACTGCAATAATCTATCCTTTGACTAGGTATGCTGTTATAATCACCCCAATAGCCAATGCTATTGAGGGCAAATCGCTTCTCTGCAAGAGCAGGCCTATTGCCATCCTCATTAGAACCATCATCGTGGTCAGCACTGTGCTTATGGCGTTATTCATTCCCTTTTTTGGTTACATTATGGCGCTTATTGGTGCATTCTTGGATGTGGCAATCTCATTGTTGTTCCCATGCCTCTGCTACCTAAAGATAAACAAAGATGCTCGGCGATTTGGGTTTGAGCTGATCGTTATCGTAGGAATTCTGCTAATAGGATCATTCATTGGGATACTGGGTACCTACATCTCTCTGAGGCAGATAGGGAGAGCACTTAATTGGCTGGAATTGCAACATGCTGATAGCATCTCTACGTGGGAAGAATTAGTTGAGAAATTCCAAAAGAAGTTTTTCCCACTCTCTCAATTCTCAGAGTTGAAGGAACAGATTGGCAACTTGAAGCAGCTCGAGGGAGAATCCCTATCTAGAGGTAGTATCGGAGAAATTACTCCACCTAGAGCTGTTGAGTTAATTGAAAAGATGACATCTGAAGATAACGAGGTCACACCAGTTCAACCTAAGCGAGGAATTATGCAGCTAGAAGGATAG 1491 0.4098 MESKSQLQVSNSGQQSGGSTFLETCFNGLNSLLGVGILSISYAVSQGGWLSFILLFIFAMMCWYTALLLQRCMDGNPQIKSYPDIGQVAFGYKGRAVVASIIYMELFLIAVELLILEGDNLEKLFPSVNFTIAGLRIGGKRGFIMLSALVILPTTWLRSLGVLAYISVGGVLASIILLGCVVWVGEVDSVGFHERGHFVNWGGMPTALSIFSFCFCVHAVLPTLINSMKDRSQSFKVMLVCFVAGTIVYGSIAIVGYMMFGECLMSQITLNLPTGKKSTKIAIYTAIIYPLTRYAVIITPIANAIEGKSLLCKSRPIAILIRTIIVVSTVLMALFIPFFGYIMALIGAFLDVAISLLFPCLCYLKINKDARRFGFELIVIVGILLIGSFIGILGTYISLRQIGRALNWLELQHADSISTWEELVEKFQKKFFPLSQFSELKEQIGNLKQLEGESLSRGSIGEITPPRAVELIEKMTSEDNEVTPVQPKRGIMQLEG 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3092g00002 496 Pfam Transmembrane amino acid transporter protein 18 371 IPR013057 -
Gabi3092g00002 496 PANTHER AMINO ACID TRANSPORTER 11 388 - -
Gabi3092g00002 496 Pfam Retrotransposon gag protein 402 456 IPR005162 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3092g00002 Gabi-Chr3092 31856 36705 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3092g00002 2 402 Amino Acid or Auxin Permease AAAP Family AT3G28960 46.650 8.12e-136 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3092g00002 K15015 - gmx:100812006 576.244