Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3089g00024 ATGAGTTCCAAAGGTGTCAATGAAGATTGTCTAGGTTGGGCAGCAAGAGATGCATCTGGAGTTCTATCACCTTACAAATTCAGTCGCAGGACTCTTGGAAACGAAGATGTTTATATTAAAATCACGCATTGCGGTGTTTGTTATGCTGATGTAGTTTGGACAAGAAATAAACATGGCGACTCAATGTATCCTGTTGTGCCTGGACATGAGATTGCTGGGATTGTGACAAAGGTTGGTTCCGATGTCCACCGTTTCAAAGTGGGTGATCATATTGGGGTGGGGACTTATGTCAACTCATGTAGGGATTGTGAGTATTGTAATGAAAGACTAGAAATTCACTGTGTCAAGGGTGTAATTCCTACTTTTAATGGTGTTGATGTTGATGGTACAATTACAAAAGGAGGATACTCGAGCTCCATAGTAGTCCATGAAAGGTATTGCTTCGTTATACCCAAAAGCTATCCATTGGCTTCAGCAGCTCCTTTGCTTTGTGCTGGAATTACTGTTTATACTCCAATGATGCGCCACAAGATGAATCAACCTGGTAAATCTCTAGGGGTGATTGGTCTTGGTGGCCTAGGTCATATGGCAGTGAAATTTGGAAAGGCATTCGGTTTGAGTGTGACAGTTATCAGCTCTAGCATGTCCAAGAAAGAGGAGGCACTGAGCCTGCTTGGAGCAGACAAATTTGTGATTTCATCTGATCAAGAGCAGATGATGGCATTGGCTAAATCGTTGGACTTTATAATTGACACGGCATCTGGTGATCACCCGTTTGATCCTTACATGTCATTGTTGAAGACATCTGGTGTTTTAGTCCTAGTTGGGTTCCCAAGTGAAGTCAAATTCAGCCCTGCAAACCTTATTCTAGGAATGAGGACTGTTTCCGGAAGTATTACAGGTGGTACAAAAGATATACAGGAGATGATTGACTTCTGTGCTGCAAACGGGATTTATCCAAATATAGAAGTGATTCCAATCGAGTACGCGAATGAAGCTATTGAGAGGGTCATAAATAAGGACGTGAAATATCGGTTTGTGATAGATATTGAGAACTCCCTAAAATAA 1068 0.4167 MSSKGVNEDCLGWAARDASGVLSPYKFSRRTLGNEDVYIKITHCGVCYADVVWTRNKHGDSMYPVVPGHEIAGIVTKVGSDVHRFKVGDHIGVGTYVNSCRDCEYCNERLEIHCVKGVIPTFNGVDVDGTITKGGYSSSIVVHERYCFVIPKSYPLASAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLSVTVISSSMSKKEEALSLLGADKFVISSDQEQMMALAKSLDFIIDTASGDHPFDPYMSLLKTSGVLVLVGFPSEVKFSPANLILGMRTVSGSITGGTKDIQEMIDFCAANGIYPNIEVIPIEYANEAIERVINKDVKYRFVIDIENSLK 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3089g00024 355 Gene3D - 13 350 - -
Gabi3089g00024 355 PANTHER ALDEHYDE REDUCTASE 9 353 IPR047109 GO:0016616
Gabi3089g00024 355 FunFam Putative cinnamyl alcohol dehydrogenase 6 321 350 - -
Gabi3089g00024 355 Pfam Alcohol dehydrogenase GroES-like domain 35 148 IPR013154 -
Gabi3089g00024 355 CDD CAD1 12 349 IPR047109 GO:0016616
Gabi3089g00024 355 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Gabi3089g00024 355 FunFam Cinnamyl alcohol dehydrogenase 165 320 - -
Gabi3089g00024 355 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491
Gabi3089g00024 355 Gene3D - 165 320 - -
Gabi3089g00024 355 SUPERFAMILY GroES-like 16 183 IPR011032 -
Gabi3089g00024 355 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 318 IPR036291 -
Gabi3089g00024 355 FunFam Uncharacterized protein 13 164 - -
Gabi3089g00024 355 Pfam Zinc-binding dehydrogenase 192 314 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3089g00024 Gabi-Chr3089 215057 218102 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3089g00024 2 355 Monolignol Biosynthesis Gene Families AT1G72680 75.141 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3089g00024 K00083 - gmx:100807617 645.58