Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3089g00023 ATGAGTTCCAAAGGTGTGATCAGTGAAGATTGTCTAGGTTGGGCAGCAAAAGATGCATCTGGAGTTCTATCACCTTACAAATTCAGTCGCAGGGCTCTTGGAAAAGAAGATGTTTATATTAAAATTACGCATTGCGGTATTTGTTATGCTGATGTAGTTTGGACAAGGAATAAACATGGCGACTCAATGTATCCTGTTGTGCCTGGACATGAGATTGCTGGGATTGTGACAAAGGTTGGTTCCGATGTCCACCGTTTCAAAGTGGGTGATCATATTGGGGTGGGGACTTATGTCAACTCATGTAGGGATTGCGAGTATTGTAATGACAGACTTGAATCTCACTGTCTCAAGGGTCTAGTTCTTACTTTTAATGGTGTGGACTTTGATGGTACAATTACAAAAGGAGGATACTCGAGCTACATAGTAGTCCATGAAAGGTATTGCTTCGTTATACCCAAAAGCTATCCATTGGCTTCAGCAGCTCCTTTGCTTTGTGCTGGAATTACTGTTTATACTCCAATGATGCGCCACAAGATGAACCAACCTGGTAAATCTCTAGGAGTGATTGGTCTTGGTGGCCTAGGTCATATGGCAGTGAAGTTTGGAAAGGCATTCGGTTTGAGTGTGACAGTTATCAGCTCTAGCATGTCCAAGAAAGAGGAGGCACTGAGCCTACTTGGTGCAGACAAATTTGTGGTTTCTTCTGATCAAGAGCAGATGATGGCATTGGCTAAATCGTTGGACTTTATAATTGACACAGCATCTGGTGATCACCCGTTTGATCCTTACATGTCATTGTTGAAGACTTCTGGTGTTTTAGTCCTTGTTGGGTTCCCAAGTGAAGTCAAATTCAGCCCTGCTAACCTTATTCTAGGAATGAAGTCTGTTTCCGGAAGTCTTACAGGTGGTACAAAAGATACACAAGAGATGATTGACTTCTGTGCCGCAAACGGGATTTATCCAAATATAGAAGTGATTCCAATCGAGTATGTGAATGAAGCAATTGAGAGGGTCATAAATAAGGACATAAAATATCGGTTTGTAATAGATATTGAGAACTCCCTAAAATAA 1071 0.4146 MSSKGVISEDCLGWAAKDASGVLSPYKFSRRALGKEDVYIKITHCGICYADVVWTRNKHGDSMYPVVPGHEIAGIVTKVGSDVHRFKVGDHIGVGTYVNSCRDCEYCNDRLESHCLKGLVLTFNGVDFDGTITKGGYSSYIVVHERYCFVIPKSYPLASAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLSVTVISSSMSKKEEALSLLGADKFVVSSDQEQMMALAKSLDFIIDTASGDHPFDPYMSLLKTSGVLVLVGFPSEVKFSPANLILGMKSVSGSLTGGTKDTQEMIDFCAANGIYPNIEVIPIEYVNEAIERVINKDIKYRFVIDIENSLK 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3089g00023 356 Gene3D - 166 321 - -
Gabi3089g00023 356 FunFam Cinnamyl alcohol dehydrogenase 166 321 - -
Gabi3089g00023 356 FunFam probable cinnamyl alcohol dehydrogenase 14 182 - -
Gabi3089g00023 356 SMART PKS_ER_names_mod 21 349 IPR020843 GO:0016491
Gabi3089g00023 356 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 319 IPR036291 -
Gabi3089g00023 356 SUPERFAMILY GroES-like 18 184 IPR011032 -
Gabi3089g00023 356 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Gabi3089g00023 356 Pfam Alcohol dehydrogenase GroES-like domain 36 149 IPR013154 -
Gabi3089g00023 356 Gene3D - 14 351 - -
Gabi3089g00023 356 Pfam Zinc-binding dehydrogenase 193 315 IPR013149 -
Gabi3089g00023 356 CDD CAD1 13 350 IPR047109 GO:0016616
Gabi3089g00023 356 PANTHER ALDEHYDE REDUCTASE 10 354 IPR047109 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3089g00023 Gabi-Chr3089 207716 210478 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3089g00023 1 356 Monolignol Biosynthesis Gene Families AT1G72680 73.876 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3089g00023 K00083 - gmx:100807617 637.876