Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3086g00037 ATGGTGAGAGCTCCTTGTTGTGAAAAGATGGGATTGAAGAAGGGTCCTTGGGCTCCTGAGGAAGATCAAATCCTCACTTCTTACATACAAAAACATGGCCATGGTAACTGGCGTGCTCTTCCAAAGCAATCAGGCTTGTTAAGGTGTGGGAAGAGCTGCAGACTGCGCTGGATTAACTATTTGAGGCCTGATATTAAGAGAGGAAATTTCACAATTGAAGAAGAGGAAACTATAATTAAGCTCCATGACATGTTGGGGAACAGGTGGTCAGCAATTGCAGCAAAATTACCAGGAAGAACTGACAATGAAATAAAAAATGTGTGGCACACCCATTTGAAAAAGAAGCTGCTGAAAACAAATCCAACCAAGCCAGTTGCAAAAAGAGTCTCTAAACCAAAAATGAAACGTTCAGATTCCAATTCCAGCACCATAACTCAATCAGAACCTGCCAGTCTTGTTAATTTCCCTGAAATGGAGACTACATCAACATGCACTACTACTTCAAGTGATTTCTCATCAGTCACAGTTGGTGAAAGCAAAAATATCAAGAGTGAAGACATAGAGTCTCTGGAGACAATGCCTGAAATTGACGAGAGCTTTTGGTCAGAAGCAGCAGCAATGGATGAAACCACCACCATGCCATCAAAATCTTTGACAATGTCAAATGAGATACAACTTCAATACCCCTTTAATTATGAGGAAAGTTTCCAACATTGTCATGGTAATAATTCAAACTTTGACGATGGAATGGATTTCTGGTATGACATATTCATCAGAACTGTGGATCCAATAGAATTGCCAGAGTTCTGA 810 0.4025 MVRAPCCEKMGLKKGPWAPEEDQILTSYIQKHGHGNWRALPKQSGLLRCGKSCRLRWINYLRPDIKRGNFTIEEEETIIKLHDMLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKKLLKTNPTKPVAKRVSKPKMKRSDSNSSTITQSEPASLVNFPEMETTSTCTTTSSDFSSVTVGESKNIKSEDIESLETMPEIDESFWSEAAAMDETTTMPSKSLTMSNEIQLQYPFNYEESFQHCHGNNSNFDDGMDFWYDIFIRTVDPIELPEF 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3086g00037 269 CDD SANT 69 112 IPR001005 -
Gabi3086g00037 269 Gene3D - 13 66 - -
Gabi3086g00037 269 CDD SANT 16 61 IPR001005 -
Gabi3086g00037 269 SMART sant 66 114 IPR001005 -
Gabi3086g00037 269 SMART sant 13 63 IPR001005 -
Gabi3086g00037 269 MobiDBLite consensus disorder prediction 122 149 - -
Gabi3086g00037 269 FunFam Transcription factor MYB15 68 141 - -
Gabi3086g00037 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Gabi3086g00037 269 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Gabi3086g00037 269 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Gabi3086g00037 269 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Gabi3086g00037 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Gabi3086g00037 269 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 211 - -
Gabi3086g00037 269 Gene3D - 68 144 - -
Gabi3086g00037 269 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Gabi3086g00037 269 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Gabi3086g00037 269 FunFam Myb transcription factor 11 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3086g00037 Gabi-Chr3086 349126 351376 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3086g00037 1 269 MYB Transcription Factor Family AT2G31180 49.270 5.60e-83 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gabi3086g00037 Myb_DNA-binding 3.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3086g00037 K09422 - gmx:100807569 430.639