Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi3086g00037 | ATGGTGAGAGCTCCTTGTTGTGAAAAGATGGGATTGAAGAAGGGTCCTTGGGCTCCTGAGGAAGATCAAATCCTCACTTCTTACATACAAAAACATGGCCATGGTAACTGGCGTGCTCTTCCAAAGCAATCAGGCTTGTTAAGGTGTGGGAAGAGCTGCAGACTGCGCTGGATTAACTATTTGAGGCCTGATATTAAGAGAGGAAATTTCACAATTGAAGAAGAGGAAACTATAATTAAGCTCCATGACATGTTGGGGAACAGGTGGTCAGCAATTGCAGCAAAATTACCAGGAAGAACTGACAATGAAATAAAAAATGTGTGGCACACCCATTTGAAAAAGAAGCTGCTGAAAACAAATCCAACCAAGCCAGTTGCAAAAAGAGTCTCTAAACCAAAAATGAAACGTTCAGATTCCAATTCCAGCACCATAACTCAATCAGAACCTGCCAGTCTTGTTAATTTCCCTGAAATGGAGACTACATCAACATGCACTACTACTTCAAGTGATTTCTCATCAGTCACAGTTGGTGAAAGCAAAAATATCAAGAGTGAAGACATAGAGTCTCTGGAGACAATGCCTGAAATTGACGAGAGCTTTTGGTCAGAAGCAGCAGCAATGGATGAAACCACCACCATGCCATCAAAATCTTTGACAATGTCAAATGAGATACAACTTCAATACCCCTTTAATTATGAGGAAAGTTTCCAACATTGTCATGGTAATAATTCAAACTTTGACGATGGAATGGATTTCTGGTATGACATATTCATCAGAACTGTGGATCCAATAGAATTGCCAGAGTTCTGA | 810 | 0.4025 | MVRAPCCEKMGLKKGPWAPEEDQILTSYIQKHGHGNWRALPKQSGLLRCGKSCRLRWINYLRPDIKRGNFTIEEEETIIKLHDMLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKKLLKTNPTKPVAKRVSKPKMKRSDSNSSTITQSEPASLVNFPEMETTSTCTTTSSDFSSVTVGESKNIKSEDIESLETMPEIDESFWSEAAAMDETTTMPSKSLTMSNEIQLQYPFNYEESFQHCHGNNSNFDDGMDFWYDIFIRTVDPIELPEF | 269 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi3086g00037 | 269 | CDD | SANT | 69 | 112 | IPR001005 | - | |
Gabi3086g00037 | 269 | Gene3D | - | 13 | 66 | - | - | |
Gabi3086g00037 | 269 | CDD | SANT | 16 | 61 | IPR001005 | - | |
Gabi3086g00037 | 269 | SMART | sant | 66 | 114 | IPR001005 | - | |
Gabi3086g00037 | 269 | SMART | sant | 13 | 63 | IPR001005 | - | |
Gabi3086g00037 | 269 | MobiDBLite | consensus disorder prediction | 122 | 149 | - | - | |
Gabi3086g00037 | 269 | FunFam | Transcription factor MYB15 | 68 | 141 | - | - | |
Gabi3086g00037 | 269 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 9 | 61 | IPR017930 | - | |
Gabi3086g00037 | 269 | Pfam | Myb-like DNA-binding domain | 67 | 112 | IPR001005 | - | |
Gabi3086g00037 | 269 | Pfam | Myb-like DNA-binding domain | 14 | 61 | IPR001005 | - | |
Gabi3086g00037 | 269 | SUPERFAMILY | Homeodomain-like | 10 | 108 | IPR009057 | - | |
Gabi3086g00037 | 269 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 62 | 116 | IPR017930 | - | |
Gabi3086g00037 | 269 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 1 | 211 | - | - | |
Gabi3086g00037 | 269 | Gene3D | - | 68 | 144 | - | - | |
Gabi3086g00037 | 269 | ProSiteProfiles | Myb-like domain profile. | 62 | 112 | IPR001005 | - | |
Gabi3086g00037 | 269 | ProSiteProfiles | Myb-like domain profile. | 9 | 61 | IPR001005 | - | |
Gabi3086g00037 | 269 | FunFam | Myb transcription factor | 11 | 67 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi3086g00037 | Gabi-Chr3086 | 349126 | 351376 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi3086g00037 | 1 | 269 | MYB Transcription Factor Family | AT2G31180 | 49.270 | 5.60e-83 | 247 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Gabi3086g00037 | Myb_DNA-binding | 3.8e-13 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi3086g00037 | K09422 | - | gmx:100807569 | 430.639 |