Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3086g00030 ATGGATCATGTTATTGGTGGAAAATTCAAGCTTGGGAGGAAGATTGGGAGTGGATCGTTTGGAGAGCTTTATTTGGGTGTTAATGTACAAAATGGAGAGGAAGTGGCTGTCAAGCTGGAATCTGTGAAGACCAAGCATCCTCAACTTCACTATGAGTCAAAATTGTATATACTTCTTCAAGGGGGAACTGGTATACCCCATTTAAAATGGTTTGGAGTTGAGGGTGACTACAATGTCATGGTCATTGATCTTCTTGGCCCAAGTCTTGAAGACTTGTTTAACTATTGCAATAGGAAATTTTCTCTGAAAACAGTTCTGATGCTTGCAGATCAGCTAATAAACAGAGTTGAGTATATGCACTCCCGGGGTTTTCTGCACCGTGATATAAAGCCTGACAACTTTTTAATGGGTTTAGGCCGTAAGGCAAATCAGCAGGTATACGTAATTGATTATGGCCTTGCAAAAAAGTACCGGGATCTCCAAACCCATAAGCATATACCATACAGGGAAAACAAAAACCTCACGGGAACTGCTCGGTATGCAAGTGTCAACACTCATCTTGGAGTTGAACAAAGCAGAAGAGATGATCTAGAATCGCTTGGTTATGTGCTGATGTACTTTTTGAGAGGAAGTCTCCCTTGGCAAGGCTTGAAAGCTGGCACTAAAAAGCAAAAATACGATAGGATAAGTGAAAAGAAGATGCTTACTCCAATAGAGGTTTTATGCAAGTCATATCCATTGGAATTCACATCATACTTCCACTACTGCCGTTCATTGCGGTTTGAAGATAAGCCTGATTATTCGTATCTTAAGAGACTCTTTCGGGATCTATTCATCCGAGAAGGCTATCAATTTGACTATGTATTTGATTGGACTATATTGAAGTATCCACAAATTGGATCCAGTTCTAGAGCTCGACCAAGTGGTAAACCAGTCATAAATGCAGGACAATCAGGAGAGAGATTAGAACGGCCTTCAGGCGGACCAGAGATTCGGGATAGATTCTCAGGTGCAGTCGAGGCATTTGCAAGGAGGAGTGGCTCTGGGCTTGCTCTACATAGGTCTTCAGATGATGTGCCATCTTCCAAAGACGTGCAAGCTGATTCTGAGAGGCCACGCAGCTTTTCTCGTAATGGCAGTTCCTCAAAAAGGCCTGTCTTATCAAGCAGCCGACCAAGCTCTTCTGGTGAGCCTAGTGAAAGCCGTTCCAATCGACTGGTTTCGAGCAGTAGCCGTCTATCTGCAACTCAGAGGTCTCAACCAGGATTTGAGTCCAAAACATATTTTACTCGTGCTTCAGGGACAAGAGGGGGTCGGGATGATGCACTCAGGAGCTTTGAGCTCCTGTCAATTGGTACAGGAAAAAGGAAATGA 1374 0.4338 MDHVIGGKFKLGRKIGSGSFGELYLGVNVQNGEEVAVKLESVKTKHPQLHYESKLYILLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQQVYVIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDRISEKKMLTPIEVLCKSYPLEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRARPSGKPVINAGQSGERLERPSGGPEIRDRFSGAVEAFARRSGSGLALHRSSDDVPSSKDVQADSERPRSFSRNGSSSKRPVLSSSRPSSSGEPSESRSNRLVSSSSRLSATQRSQPGFESKTYFTRASGTRGGRDDALRSFELLSIGTGKRK 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3086g00030 457 Gene3D Transferase(Phosphotransferase) domain 1 1 323 - -
Gabi3086g00030 457 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Gabi3086g00030 457 FunFam Putative Casein kinase I 1 85 - -
Gabi3086g00030 457 SMART serkin_6 9 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3086g00030 457 FunFam Casein kinase 1-like protein 1 330 - -
Gabi3086g00030 457 SUPERFAMILY Protein kinase-like (PK-like) 4 291 IPR011009 -
Gabi3086g00030 457 PANTHER CASEIN KINASE-RELATED 9 411 - -
Gabi3086g00030 457 MobiDBLite consensus disorder prediction 372 432 - -
Gabi3086g00030 457 MobiDBLite consensus disorder prediction 357 371 - -
Gabi3086g00030 457 ProSiteProfiles Protein kinase domain profile. 9 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3086g00030 457 MobiDBLite consensus disorder prediction 350 440 - -
Gabi3086g00030 457 MobiDBLite consensus disorder prediction 301 330 - -
Gabi3086g00030 457 Pfam Protein kinase domain 10 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3086g00030 457 CDD STKc_CK1_delta_epsilon 8 283 - -
Gabi3086g00030 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3086g00030 Gabi-Chr3086 263032 270764 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3086g00030 8 214 MAP Kinase Kinase Kinase AT3G06030 25.346 1.42e-13 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Gabi3086g00030 Pkinase 1.5e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3086g00030 K08960 - gmx:100804897 797.734