Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3086g00017 ATGGGATTCAGATATCTTCATCTCAAGCTCAAGGTACTCCGGCTGAAACGGTTTTTGCTAGGACATGGAAGAAGAAAGAGAAAGAACATGCCGCCGGCAAAGAAGCCTTCATGGATGATGCCAATAAGTCATGGTTATCATGTTATGGAGCATCATATGATCAGAGATGGTTCTGATGACTCAGACTTTGATTCAGTTGTGGTACAGAGAGAGCAAATGGATCACACAGAATTGTGGTATTTTGGAATCTTTGATGCATTCATTGGAGACGGGGTTACCAAGTACATGCAGTCCCATTTCTTTGACAAGAAGCTTCAAGAGTCTCATATAAGGAGAAAAAGCAAAGAAATGCTGAAGAGAGCTTACCTTGGTGTAAGGGCAAAGATCAGAGAGGAACACAAGTCAGAGGAGACATGCAAAATGGGTTCAGCATCTGTTATGGTGATCAATGGGGAAAAACTTGTAATAGCTAACATGGGAGATTACAGAACTGTTGTGTGCAGAGATGGTATAGCTCATCAGACAACTAGCACATACCAACAATCAGCCAAAAGACATTGGTCTAGCAGACTCTTTGCAGGAAATGTAGCTGGTACAAGGCGTTCTAGAGGCTCAGAACTTGTCATCAGAGATGAAAGTATTGATTCTGATACTGAATTTTTGATATTAGCAAGCAATGGCATATGGGAGGTAATGAAGAGCCAAGAGGCTGTGAATCTGATCAGTCACATAGAGGATCCACAAGAAGCAGCTGAATGCTTGGCAAAGGAAGCTTTAATGAGGATGAGCAAAAGCAGCATCTCATGCTTAATCATTCGATTTGACTGA 828 0.4179 MGFRYLHLKLKVLRLKRFLLGHGRRKRKNMPPAKKPSWMMPISHGYHVMEHHMIRDGSDDSDFDSVVVQREQMDHTELWYFGIFDAFIGDGVTKYMQSHFFDKKLQESHIRRKSKEMLKRAYLGVRAKIREEHKSEETCKMGSASVMVINGEKLVIANMGDYRTVVCRDGIAHQTTSTYQQSAKRHWSSRLFAGNVAGTRRSRGSELVIRDESIDSDTEFLILASNGIWEVMKSQEAVNLISHIEDPQEAAECLAKEALMRMSKSSISCLIIRFD 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3086g00017 275 Pfam Protein phosphatase 2C 212 266 IPR001932 -
Gabi3086g00017 275 Pfam Protein phosphatase 2C 77 180 IPR001932 -
Gabi3086g00017 275 SMART PP2C_4 50 272 IPR001932 -
Gabi3086g00017 275 Gene3D - 52 275 IPR036457 -
Gabi3086g00017 275 ProSiteProfiles PPM-type phosphatase domain profile. 60 274 IPR001932 -
Gabi3086g00017 275 CDD PP2Cc 80 274 IPR001932 -
Gabi3086g00017 275 PANTHER PROTEIN PHOSPHATASE 35 273 IPR015655 GO:0004722|GO:0006470
Gabi3086g00017 275 SUPERFAMILY PP2C-like 64 275 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3086g00017 Gabi-Chr3086 172266 174262 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3086g00017 1 274 PP2C-type Phosphatase Gene Family AT3G23360 49.821 1.31e-86 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3086g00017 K19704 - gmx:100785227 418.698