Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3086g00016 ATGAGGTACGTTGAGATCGGGAGGGTGGCTCTGATCAACTACGGCAAGGAATATGGTAAGCTCGTGGTCATCGTCGACGTCATTGACCAAAACAGAGCTCTTGTTGATGCCCCTGATATGGTGAGCTCCCAAGTGAATTTCAAGAGGCTTTCACTCACTGACATCAAGATTGACATTAAGAGGGTCCCCAAAAAGAAAGATCTTGTTAAAGCCATGGAGGCTGCAGATGTTAAGAACAAGTGGGAGAACAGCTCCTGGGGAAGAAAACTCATTGTCAAAAAGAGAAGGGCGTCTCTCAATGATCTTGATAGGTTTAAGTTAATGTTGACAAAGATCAAGAGGGCAGCTATTGTTAGGCAAGAGCTTGCAAAGCTGAAAAAAAGCGCATAA 390 0.4436 MRYVEIGRVALINYGKEYGKLVVIVDVIDQNRALVDAPDMVSSQVNFKRLSLTDIKIDIKRVPKKKDLVKAMEAADVKNKWENSSWGRKLIVKKRRASLNDLDRFKLMLTKIKRAAIVRQELAKLKKSA 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3086g00016 129 Gene3D - 1 81 IPR014722 -
Gabi3086g00016 129 PANTHER 60S RIBOSOMAL PROTEIN L14 2 128 IPR039660 GO:0003723|GO:0003735
Gabi3086g00016 129 FunFam 60S ribosomal protein L14-1 1 81 - -
Gabi3086g00016 129 SUPERFAMILY Translation proteins SH3-like domain 1 90 IPR008991 -
Gabi3086g00016 129 CDD KOW_RPL14 4 76 IPR041985 -
Gabi3086g00016 129 Gene3D - 89 124 - -
Gabi3086g00016 129 Pfam Ribosomal protein L14 44 114 IPR002784 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3086g00016 Gabi-Chr3086 166769 168080 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3086g00016 2 128 Cytoplasmic Ribosomal Protein Gene Family AT4G27090 80.315 7.44e-71 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3086g00016 K02875 - gmx:100499889 231.106