Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3086g00003 ATGACAACTTCATTGGCCTTTGCTCAATTCTACGACTCATGGTTCGACCACTTGCACCACCTCGTGCAGCAGCTTGCCTCCTTCTCCGCCACCTCCGCCTCCGGTGGACCGCCCCTCGTGGCGGAGGAAAACGACGAGCGGATCCACCTGATCGACAAGGTGATGTCACACCACGAAGACTACTACCGAGCCAAGTCACTGGCGGCGGAGAAGGACCCACTGAACGTGTTCGTTTCGCCGTGGGCCACCACATTGGAACGGTCCCTTCATTGGATCACCGGGTGGCGCCCCACCACCGCCTTCCACCTTATCTATACGGAGTCCTCCGTCCTCTTTGAGTCACGCATCGTCGATATCCTCCGCGGCATCCGCACCGGCGATCTTGGTGATCTTTCTCCAACTCAGTTCCGCCGAGTCAGCGAGTTACAATGTGACACTGTGAAAGAAGAGAATGCAATAACGGAGGAGCTATCGGAGTGGCAAGACAGTGCTTGCGACATGATGGGCCCACGCGCCGATATCAACGAGAAGATCGGACGGCTGGTAAGCATTATAAGGAAAGCTGATGATCTACGGCTCAGAACGTTGAGGAGCGTGGTGGGGTTGCTGTCGCCGCAGCAGGCTATCGAGTTCTTGATCGCCTCAGCAGAGTTGCTCGTTGGGATCCGCGGTTGGGGATTGAATCATGACCGTCCACGTCGCAGATAA 708 0.5664 MTTSLAFAQFYDSWFDHLHHLVQQLASFSATSASGGPPLVAEENDERIHLIDKVMSHHEDYYRAKSLAAEKDPLNVFVSPWATTLERSLHWITGWRPTTAFHLIYTESSVLFESRIVDILRGIRTGDLGDLSPTQFRRVSELQCDTVKEENAITEELSEWQDSACDMMGPRADINEKIGRLVSIIRKADDLRLRTLRSVVGLLSPQQAIEFLIASAELLVGIRGWGLNHDRPRRR 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3086g00003 235 Pfam Seed dormancy control 43 106 IPR025422 GO:0006351|GO:0043565
Gabi3086g00003 235 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 7 233 - -
Gabi3086g00003 235 ProSiteProfiles DOG1 domain profile. 4 232 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3086g00003 Gabi-Chr3086 25616 27554 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3086g00003 4 214 bZIP Transcription Factor Family AT5G06960 25.877 3.79e-16 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3086g00003 - - gsj:114374825 345.895