Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3085g00033 ATGGAGAAAGAGTGCCCGACGACGAAGGACGAGGCTTCAGCAGGTGTCGTTTTGTTCGGGAAATACGAGATAGTGAAGTTGCTGGGCGTTGGCGGGTTCGCGAAGGTGTACCACGCGCGGAACGTGAACACGATGGAGAGCGTGGCGGTGAAGGCCGTGAGCAAACGCAAGGTCCAGAAAAACGGTTACATGGCGCACGTTGAGCGCGAAGTCTCTATCATGCGCCGACTGCGCCACCCGCACACTGTGGAACTCTTCGAGGTCCTCGCAACCAAGACTAAGATCTACTTCGTCATGGAGTTTGCATCCGGCGGCGACCTCTTCGGAGTTATGGCCGCCGAGGGACGCTTCACGGAGGATCTCAGCCGGAGATATTTCCGGCAGCTCATCTCCGCCGTCAAGCACTGCCACTCCCGCGGTGTCTTCCACCGCGACCTCAAGCTCGACAACATCCTCGTCGACGAAAACAAGAACATCAAAGTGTCGGATTTCGGGTTGGGCTCAATTAAGGACCCGACCCGACCCGAAGGTTTGCTCCATACAGTTTGTGGGACCCCTGCCTACGTGGCACCTGAGATCCTCGCTAGGAAGGGCTATGATGGTGCGACGGTGGATGTGTGGTCTTGCGGCGTCGTTTTGTTCGTACTCACCGCTGGGTATTTGCCCTTCAATGATTACAATATTACGGTTTTGTACAGGAAGATCTATAGAGGACAGTTCCGGTTCCCGAAATGGACATCGAATGAACTGAGGAACCTCTTATCGAGGTTGTTGGACACAAACCCAAATACGAGAATAACCGTTGATGAGATCATGCGGGACCCATGGTTCTGTCATGGCGGGTATAAGGACACATGGGTCGGGTCGGACCCTGAACGGGAGAAGAATTATCAGGCTGTGACTAAGAGATTGAACGCGTTTGATTTGATATCTTTTTCATCCGGGTTGGACATGTCGGGTTTATTTACTGACCCGGAACATTCGGATTGCACTGAACGGTTTGTCACGGAGAAGTTGCCGCAGAAGGTGGTGGAGATGGTGGAGGAGGTGGCGGAGATGGAAAGACTAGTGAGAGTGATAAAGGGTGGTGAGAGCGGTTGTGGAGGAGTGAGGCTAGAGGGGTTGAATGGTAATTTTGGAATTGTTGTTCGGGTTTACCGGTTAACGGATGAGCTTTATGTGATTGAAGTGAAGAGAAGTGAGAGAGGAGTGGCAATTGGTGAACGGTTTTGGAGAGATGCTTTAAAGCCACGGCTTCTTGCATTGGCTCTTAAACCGGATGTGCCTGTCTCCCGGTGA 1299 0.5266 MEKECPTTKDEASAGVVLFGKYEIVKLLGVGGFAKVYHARNVNTMESVAVKAVSKRKVQKNGYMAHVEREVSIMRRLRHPHTVELFEVLATKTKIYFVMEFASGGDLFGVMAAEGRFTEDLSRRYFRQLISAVKHCHSRGVFHRDLKLDNILVDENKNIKVSDFGLGSIKDPTRPEGLLHTVCGTPAYVAPEILARKGYDGATVDVWSCGVVLFVLTAGYLPFNDYNITVLYRKIYRGQFRFPKWTSNELRNLLSRLLDTNPNTRITVDEIMRDPWFCHGGYKDTWVGSDPEREKNYQAVTKRLNAFDLISFSSGLDMSGLFTDPEHSDCTERFVTEKLPQKVVEMVEEVAEMERLVRVIKGGESGCGGVRLEGLNGNFGIVVRVYRLTDELYVIEVKRSERGVAIGERFWRDALKPRLLALALKPDVPVSR 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3085g00033 432 Pfam NAF domain 303 356 IPR004041 GO:0007165
Gabi3085g00033 432 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 17 399 - -
Gabi3085g00033 432 FunFam CAMK family protein kinase 17 306 - -
Gabi3085g00033 432 Gene3D Kinase associated domain 1, KA1 300 423 - -
Gabi3085g00033 432 CDD CIPK_C 305 417 - -
Gabi3085g00033 432 SMART serkin_6 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3085g00033 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Gabi3085g00033 432 Pfam Protein kinase domain 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3085g00033 432 SUPERFAMILY Protein kinase-like (PK-like) 18 298 IPR011009 -
Gabi3085g00033 432 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Gabi3085g00033 432 ProSiteProfiles NAF domain profile. 299 323 IPR018451 GO:0007165
Gabi3085g00033 432 ProSiteProfiles Protein kinase domain profile. 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3085g00033 432 Gene3D Transferase(Phosphotransferase) domain 1 104 281 - -
Gabi3085g00033 432 FunFam Aurora kinase A 16 105 - -
Gabi3085g00033 432 Gene3D Phosphorylase Kinase; domain 1 19 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3085g00033 Gabi-Chr3085 427418 428986 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3085g00033 17 420 CBL-interacting serine-threonine protein kinases AT2G30360 55.012 3.35e-159 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gabi3085g00033 Pkinase 6e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3085g00033 - K12761 gmx:100810319 503.827