Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3085g00027 ATGTACAAGGGAAGACTAGGAGGCAAAGCTCAACTTGGATATGTTGAAACTGACCCATCTGGTCGGTATGGACGTTTCAGGGATATTCTAGGCAAAGGAGCCATGAAGGTAGTGTATAGGGCCTTTGATGAGGTCCAAGGAATGGAAGTTGCTTGGAACCAAGTCAAGCTTGGTGACGTTTTTCATTCACCTGACCAACTTCATCGCCTTTATTCAGAGGTTCATCTCCTCAAGAACTTGAGTCATGACTCTATCATGACCTTCCATGATTCGTGGATCGATGTCAATCATAGAACCTTCAACTTCATCACTGAATTGTTCACCTCTGGCACCCTACGAGAGTATAGAAGGAAGTATCCTAGAGTAGATATCAGAGCAGTGAAGAACTGGGCTCGCCAGATTCTAAGTGGTTTGGAGTATTTGCATAGCCATGATCCACCTGTGATACATAGAGACCTCAAGGGTGATAACATCTTTGTCAATGGCCATTTGGGGCAGGTCAAGATTGGTGACTTAGGACTTGCAGCCATTCTAAGTGGCTCTCAACATGCCCACAGTGTCATAGGTACGCCAGAATTTATGGCACCAGAGTTGTATGAAGAGGAATACAATGAGCTGGTAGACATATACTCTTTTGGGATGTGTATGATAGAGTTGTTTACTTCTGAGTTCCCATACAGCGAGTGCTCCAACCCTGCTCAAATTTACAAGAAAGTTACTTCAGGGAAGCTACCAGATGCATTTTACAGAATCCACGATTTGGAAGCCCAGAGGTTTGTGGGAAAATGTTTGGCAAATGTCTCAGAGAGGTTGCCAGCAAAGGAGCTCTTACTGGATCCATTTTTAGCCATGGATCAACTTGACTCACCATTGCCTAGCCCAACATTACCCAGAAAACATACTCAAACACTCAATTTCACTTCAGCAGTTGCCAAAGAGGAACCTTCAATGATTGACCAAACAAAGAGTACACACATGACAATCACTGGGTCAATAAATGAAGAGGATGACACAGTTTTCCTTAAAGTACAGATTTCTAACAAAACTGGAAACACAAGAAATATATACTTTCCATTTGACACCATAAACGACACTGCCATTGAAGTGGCAATTGAGATGGTTAAAGAACTGGAAATTAGTGACTGGGAACCATTGGAGATTGCTGAAATGATAGAAGAGGAGATATCAGCTTTAGTTCCAACATGGAGGGATTGGAGCACTTCTAAGTATCAACAACAACATAGTTTTAGCTATGAAGAAGAGGATGATATAAGTAACCACCATCCTTTCTTCTCATCATCTTCTCTCTCTTCCTCTCACGGTTCTCTCCCAGTGTTTGGTTCTTCCAACAAGAACAATACCCAACTTTATGGGAACCATTACCCTTTTGCTCAAGATTGGCCTCAAGATGATCTATTTATGAATGATGATGCGAGCTCTCAAAGCTCAATGAACTCCTTGAAGTGTTTCAATTTTCATTGCTGTGACTCAGGCAATGAAAATGAGCATAGTCCAACTATACTAGTTGGAACAGAACCAATTTGCTACACGCCAAAGGCCAACAACAAGTGCACAAGATTCTGTCCTAGAGAAGAGATGGTGGAGGCTGATTCCACCAAACAGTTTTGCAACATGAGAATGGATTCTAGCAGGTATCATAGGCCAATGCATGGATGCCAAAGTCTGACAAGGATTCATTCCTATGCGGATTTGAGGAGACACCAACTACAAAGATCACTGATAGAGGAGATACACAAGAGGAGGATGTTCAAGACGGTTGGTGCTATTGAGAACATTGGGTTTCAGAATCCAGAAAGAGGTGGATGTTATCCTCGTTGA 1839 0.4236 MYKGRLGGKAQLGYVETDPSGRYGRFRDILGKGAMKVVYRAFDEVQGMEVAWNQVKLGDVFHSPDQLHRLYSEVHLLKNLSHDSIMTFHDSWIDVNHRTFNFITELFTSGTLREYRRKYPRVDIRAVKNWARQILSGLEYLHSHDPPVIHRDLKGDNIFVNGHLGQVKIGDLGLAAILSGSQHAHSVIGTPEFMAPELYEEEYNELVDIYSFGMCMIELFTSEFPYSECSNPAQIYKKVTSGKLPDAFYRIHDLEAQRFVGKCLANVSERLPAKELLLDPFLAMDQLDSPLPSPTLPRKHTQTLNFTSAVAKEEPSMIDQTKSTHMTITGSINEEDDTVFLKVQISNKTGNTRNIYFPFDTINDTAIEVAIEMVKELEISDWEPLEIAEMIEEEISALVPTWRDWSTSKYQQQHSFSYEEEDDISNHHPFFSSSSLSSSHGSLPVFGSSNKNNTQLYGNHYPFAQDWPQDDLFMNDDASSQSSMNSLKCFNFHCCDSGNENEHSPTILVGTEPICYTPKANNKCTRFCPREEMVEADSTKQFCNMRMDSSRYHRPMHGCQSLTRIHSYADLRRHQLQRSLIEEIHKRRMFKTVGAIENIGFQNPERGGCYPR 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3085g00027 612 FunFam probable serine/threonine-protein kinase WNK9 107 287 - -
Gabi3085g00027 612 Gene3D Transferase(Phosphotransferase) domain 1 107 287 - -
Gabi3085g00027 612 SUPERFAMILY Protein kinase-like (PK-like) 26 283 IPR011009 -
Gabi3085g00027 612 Gene3D Phosphorylase Kinase; domain 1 9 105 - -
Gabi3085g00027 612 SMART serkin_6 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3085g00027 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Gabi3085g00027 612 CDD STKc_WNK 22 282 - -
Gabi3085g00027 612 Gene3D - 338 404 - -
Gabi3085g00027 612 Pfam Protein kinase domain 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3085g00027 612 ProSiteProfiles Protein kinase domain profile. 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3085g00027 612 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 13 486 - -
Gabi3085g00027 612 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3085g00027 Gabi-Chr3085 338696 343023 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3085g00027 12 423 MAP Kinase Kinase Kinase AT3G51630 69.976 0.0 599
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gabi3085g00027 Pkinase 4.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3085g00027 K08867 - gmx:100816187 1033.09