Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3085g00026 ATGTACAAGGGAAGACTAGGAGGCAAAGCTCAACTTGGATATGTTGAAACTGACCCATCTGGTCGGTATGGACGTTTCAGGGATATTCTAGGCAAAGGAGCCATGAAGGTAGTGTATAGGGCCTTTGATGAGGTCCAAGGAATGGAAGTTGCTTGGAACCAAGTCAAGCTTGGTGACGTTTTTCATTCACCTGACCAACTTCATCGCCTTTATTCAGAGGTTCATCTCCTCAAGAACTTGAGTCATGACTCTATCATGACCTTCCATGATTCGTGGATCGATGTCAATCATAGAACCTTCAACTTCATCACTGAATTGTTCACCTCTGGCACCCTACGAGAGTATAGAAGGAAGTATCCTAGAGTAGATATCAGAGCAGTGAAGAACTGGGCTCGCCAGATTCTAAGTGGTTTGGAGTATTTGCATAGCCATGATCCACCTGTGATACATAGAGACCTCAAGGGTGATAACATCTTTGTCAATGGCCATTTGGGGCAGGTCAAGATTGGTGACTTAGGACTTGCAGCCATTCTAAGTGGCTCTCAACATGCCCACAGTGTCATAGGCAATTCCTCTTGCTCTTTTTACTTGGTACTTAAATTATCAATAATGAGTAATCTAAAACTTAACCATGTGTTTATAAAACTGAAATTTTGTGTTTGGTATGAACCATCAGGTACGCCAGAATTTATGGCACCAGAGTTGTATGAAGAGGAATACAATGAGCTGGTAGACATATACTCTTTTGGGATGTGTATGATAGAGTTGTTTACTTCTGAGTTCCCATACAGCGAGTGCTCCAACCCTGCTCAAATTTACAAGAAAGTTACTTCAGGGAAGCTACCAGATGCATTTTACAGAATCCACGATTTGGAAGCCCAGAGGTTTGTGGGAAAATGTTTGGCAAATGTCTCAGAGAGGTTGCCAGCAAAGGAGCTCTTACTGGATCCATTTTTAGCCATGGATCAACTTGACTCACCATTGCCTAGCCCAACATTACCCAGAAAACATACTCAAACACTCAATTTCACTTCAGCAGTTGCCAAAGAGGAACCTTCAATGATTGACCAAACAAAGAGTACACACATGACAATCACTGGGTCAATAAATGAAGAGGATGACACAGTTTTCCTTAAAGTACAGATTTCTAACAAAACTGGAAACACAAGAAATATATACTTTCCATTTGACACCATAAACGACACTGCCATTGAAGTGGCAATTGAGATGGTTAAAGAACTGGAAATTAGTGACTGGGAACCATTGGAGATTGCTGAAATGATAGAAGAGGAGATATCAGCTTTAGTTCCAACATGGAGGGATTGGAGCACTTCTAAGTATCAACAACAACATAGTTTTAGCTATGAAGAAGAGGATGATATAAGTAACCACCATCCTTTCTTCTCATCATCTTCTCTCTCTTCCTCTCACGGTTCTCTCCCAGTGTTTGGTTCTTCCAACAAGAACAATACCCAACTTTATGGGAACCATTACCCTTTTGCTCAAGATTGGCCTCAAGATGATCTATTTATGAATGATGATGCGAGCTCTCAAAGCTCAATGAACTCCTTGAAGTGTTTCAATTTTCATTGCTGTGACTCAGGCAATGAAAATGAGCATAGTCCAACTATACTAGTTGGAACAGAACCAATTTGCTACACGCCAAAGGCCAACAACAAGTGCACAAGATTCTGTCCTAGAGAAGAGATGGTGGAGGCTGATTCCACCAAACAGTTTTGCAACATGAGAATGGATTCTAGCAGGTATCATAGGCCAATGCATGGATGCCAAAGTCTGACAAGGATTCATTCCTATGCGGATTTGAGGAGACACCAACTACAAAGATCACTGATAGAGGAGATACACAAGAGGAGGATGTTCAAGACGGTTGGTGCTATTGAGAACATTGGGTTTCAGAATCCAGAAAGAGGTGGATGTTATCCTCGTTGA 1950 0.4159 MYKGRLGGKAQLGYVETDPSGRYGRFRDILGKGAMKVVYRAFDEVQGMEVAWNQVKLGDVFHSPDQLHRLYSEVHLLKNLSHDSIMTFHDSWIDVNHRTFNFITELFTSGTLREYRRKYPRVDIRAVKNWARQILSGLEYLHSHDPPVIHRDLKGDNIFVNGHLGQVKIGDLGLAAILSGSQHAHSVIGNSSCSFYLVLKLSIMSNLKLNHVFIKLKFCVWYEPSGTPEFMAPELYEEEYNELVDIYSFGMCMIELFTSEFPYSECSNPAQIYKKVTSGKLPDAFYRIHDLEAQRFVGKCLANVSERLPAKELLLDPFLAMDQLDSPLPSPTLPRKHTQTLNFTSAVAKEEPSMIDQTKSTHMTITGSINEEDDTVFLKVQISNKTGNTRNIYFPFDTINDTAIEVAIEMVKELEISDWEPLEIAEMIEEEISALVPTWRDWSTSKYQQQHSFSYEEEDDISNHHPFFSSSSLSSSHGSLPVFGSSNKNNTQLYGNHYPFAQDWPQDDLFMNDDASSQSSMNSLKCFNFHCCDSGNENEHSPTILVGTEPICYTPKANNKCTRFCPREEMVEADSTKQFCNMRMDSSRYHRPMHGCQSLTRIHSYADLRRHQLQRSLIEEIHKRRMFKTVGAIENIGFQNPERGGCYPR 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3085g00026 649 Pfam Protein kinase domain 28 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3085g00026 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Gabi3085g00026 649 ProSiteProfiles Protein kinase domain profile. 24 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3085g00026 649 Gene3D - 375 441 - -
Gabi3085g00026 649 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Gabi3085g00026 649 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 13 523 - -
Gabi3085g00026 649 Gene3D Transferase(Phosphotransferase) domain 1 107 324 - -
Gabi3085g00026 649 SUPERFAMILY Protein kinase-like (PK-like) 26 320 IPR011009 -
Gabi3085g00026 649 Gene3D Phosphorylase Kinase; domain 1 9 105 - -
Gabi3085g00026 649 SMART serkin_6 24 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3085g00026 Gabi-Chr3085 338696 343023 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3085g00026 12 460 MAP Kinase Kinase Kinase AT3G51630 64.222 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gabi3085g00026 Pkinase 2.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3085g00026 K08867 - gmx:100816187 1014.6