Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3082g00001 ATGGCCAAGATTCCATTTGAAAATATGGGTTGCATTCTAACAATCTATCTTCTTTTCGGCATAATGTTCTCAACAAATGCTCAATTTGTTGAGAAGACTTATCTCATTCAAATGGATAAGTCAGCAATGCCAAAAACCTTCTCCAATCACCTTGAATGGTATTCTTCAAAAGTGAAATCAGCACTGTCCACATCTCTAGAAGCTGATATGGACAATGAAGAAAGAATAATTTACACTTACCAGAATGCTTTTCATGGAGTTGCAGCCAAATTGAGTGGAGAAGAAGTTGAGAAGCTAGAGGCTGAAGAAGGTGTTGTGGCCATATTCCCTGATACAAAGTATGAGCTACACACAACAAGAAGTCCCAAGTTCCTTGGGCTTGAAACAGCACAAAGCACTAACATCTGGTCAGAAAAACTAGCTGACTATGATGTTATAGTGGGAGTGTTAGACACTGGAATTTGGCCAGAGAGTGAAAGCTTCAATGATACTGGCATGAAACCAGTACCTGCTCACTGGAAAGGTGCCTGTGAGATAGGACCAGGCTTCAGAAAACATCACTGCAATAAAAAGATTGTGGGGGCAAGAGTGTTCTACCATGGATATGAAGCAGCAACTGGTAAAATTAATGAGCAAAAAGAGTATAAATCACCAAGAGATCAAGTTGGTCATGGCACTCACACTGCAGCTACAGTTGCTGGCTCTCCTGTGCTTGGGGCTAACCTTCTAGGCTATGCTTATGGCACAGCAAGAGGAATGGCACCAAGAGCAAGAGTTGCAGCTTACAAAGTCTGTTGGATTGGTGGGTGCTTCAGCTCAGATATTCTGTCAGCTATTGATAAAGCTGTAGCTGATGGAGTGAATGTTTTATCCATCTCTTTAGGTGGTGGAGTCTCCTCTTATTACCATGATAGTTTATCTGTAGCTGCATTTGGAGCAATGGAGAGGGGTGTTTTTGTTTCATGTTCTGCTGGAAATGCTGGACCTGACCCTGTTAGCATCACCAATGTGTCACCTTGGATCACAACAGTGGGAGCCAGCACAATGGATAGAGATTTTCCTGCAGATGTTAAGCTTGGGAATGGACAAAATGTTACTGGAGTTTCACTCTATAAAGGGCAAGGTATGCCATCAATTAAGAAACAATACCCTTTGGTATACTTGGGCAGTAACTCAAGCAGCCTTGATCCAAGATCTCTGTGCTTGGAAGGGACTTTGAATCCTCAAGTGGTTTCAGGAAAGATTGTAATTTGTGACAGAGGCCTTAGTCCTAGAGTGCAAAAGGGTCATGCGGTGAAAAGTGCAGGAGGGGTGGGAATGATTCTTACAAATACTGCAGCTAATGGAGAAGAGTTGGTTGCAGATTGTCACCTTCTTCCAGCAGTTGCAATAGGAGAGAAAGAAGGGAAGGAGCTCAAACATTTTGTCTTAACAAATAAAAATGCCACTGCAACTCTAGATTTTCTTGGAACAAGGTTGGGGATTAGACCATCTCCTGTTGTAGCAGCATTTTCATCAAGAGGGCCTAATTTTCTCACCCTTGAAATTCTGAAGCCTGATTTAGTAGCTCCTGGGGTGAACATTCTTGCTGCGTGGAGTGAAGTCATTGGTCCATCAAGTTTGCCAACAGACCAAAGGAGAGTGAAGTTCAATATACTCTCTGGAACTTCAATGTCATGCCCACATGTGAGTGGGATAGCAGCATTGCTCAAGGCTAAGCACCCAGAATGGAGTCCAGCAGCTATAAAATCTGCCTTGATGACAACAGCTCATGTTTATGACAACACCATGAACCCTCTAAGAGATGCCTCAACTGCTGAACCTTCAAGTCCTTATGATCATGGTGCTGGACACATTAACCCCATTAGTGCTCTTGACCCAGGTTTAGTCTATGACATTGAGCCACAGGATTACTTTGAATTCTTATGCACACAGAAGCTAACTCCAACTCAGCTTGGAGTTTTTGCCAAATACTCAAACAGATCTTGTAAACACTCTCTTGCCAATCCAGGGGACTTGAACTACCCAGCAATATCATTAGTGTTTCCTGAGAAAACTTCCATTTCAGTTTTAACAGTTCATAGAACTGTCACCAATGTTGGCCCTCCTGTTTCTAAATACCATGTTGTGGTGTCACCATTCAAAGGTGCTTCTGTTAAAGTTGAGCCAGAAACCTTGAATTATACCAGAAAAAACCAGAAGCTATCTTACAAGGTTACCTTCACAACAAAGTCTCGGCAAAAAACACCTGAATTTGGAGCTCTGGTATGGAAGGATGGTGTGCACAGTGCGAGAAGCCCCATTGTGATAACATGGCTGCAACCAATATGA 2331 0.4264 MAKIPFENMGCILTIYLLFGIMFSTNAQFVEKTYLIQMDKSAMPKTFSNHLEWYSSKVKSALSTSLEADMDNEERIIYTYQNAFHGVAAKLSGEEVEKLEAEEGVVAIFPDTKYELHTTRSPKFLGLETAQSTNIWSEKLADYDVIVGVLDTGIWPESESFNDTGMKPVPAHWKGACEIGPGFRKHHCNKKIVGARVFYHGYEAATGKINEQKEYKSPRDQVGHGTHTAATVAGSPVLGANLLGYAYGTARGMAPRARVAAYKVCWIGGCFSSDILSAIDKAVADGVNVLSISLGGGVSSYYHDSLSVAAFGAMERGVFVSCSAGNAGPDPVSITNVSPWITTVGASTMDRDFPADVKLGNGQNVTGVSLYKGQGMPSIKKQYPLVYLGSNSSSLDPRSLCLEGTLNPQVVSGKIVICDRGLSPRVQKGHAVKSAGGVGMILTNTAANGEELVADCHLLPAVAIGEKEGKELKHFVLTNKNATATLDFLGTRLGIRPSPVVAAFSSRGPNFLTLEILKPDLVAPGVNILAAWSEVIGPSSLPTDQRRVKFNILSGTSMSCPHVSGIAALLKAKHPEWSPAAIKSALMTTAHVYDNTMNPLRDASTAEPSSPYDHGAGHINPISALDPGLVYDIEPQDYFEFLCTQKLTPTQLGVFAKYSNRSCKHSLANPGDLNYPAISLVFPEKTSISVLTVHRTVTNVGPPVSKYHVVVSPFKGASVKVEPETLNYTRKNQKLSYKVTFTTKSRQKTPEFGALVWKDGVHSARSPIVITWLQPI 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3082g00001 776 CDD Peptidases_S8_3 114 591 IPR034197 -
Gabi3082g00001 776 Gene3D - 350 494 - -
Gabi3082g00001 776 PRINTS Subtilisin serine protease family (S8) signature 220 233 IPR015500 -
Gabi3082g00001 776 PRINTS Subtilisin serine protease family (S8) signature 554 570 IPR015500 -
Gabi3082g00001 776 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Gabi3082g00001 776 ProSiteProfiles Serine proteases, subtilase domain profile. 113 625 - -
Gabi3082g00001 776 FunFam subtilisin-like protease SBT1.5 350 493 - -
Gabi3082g00001 776 ProSitePatterns Serine proteases, subtilase family, serine active site. 555 565 IPR023828 -
Gabi3082g00001 776 Pfam Peptidase inhibitor I9 33 117 IPR010259 -
Gabi3082g00001 776 Pfam PA domain 382 472 IPR003137 -
Gabi3082g00001 776 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 117 IPR037045 -
Gabi3082g00001 776 CDD PA_subtilisin_like 356 486 - -
Gabi3082g00001 776 FunFam Subtilisin-like protease SBT1.9 22 117 - -
Gabi3082g00001 776 Gene3D Peptidase S8/S53 domain 144 638 IPR036852 GO:0004252|GO:0006508
Gabi3082g00001 776 Pfam Subtilase family 144 598 IPR000209 GO:0006508|GO:0008236
Gabi3082g00001 776 SUPERFAMILY Subtilisin-like 116 629 IPR036852 GO:0004252|GO:0006508
Gabi3082g00001 776 Gene3D - 642 773 - -
Gabi3082g00001 776 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 68 769 IPR045051 -
Gabi3082g00001 776 Pfam Fibronectin type-III domain 672 770 IPR041469 -
Gabi3082g00001 776 FunFam Subtilisin-like protease SBT1.5 144 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3082g00001 Gabi-Chr3082 22114 24509 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3082g00001 12 776 Subtilisin-like Serine Gene Family AT5G51750 70.757 0.0 1140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3082g00001 - - gmx:102661592 1303.5