Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3081g00002 ATGTCAGAACTTGTCAAAAATCCAAGCATGATGGAAAGAGCACAAGCTGAAATAAGAAGGGTCTTTGATGGTAAAGGTCATGTAGATGAAGCTAACCTCCATGAACTTAAATACTTAAAGTCAGTTATCAAAGAAACCTTGCGTCTACATATTCCTGCTCCATTTTTACTACCAAGGGAATGCACTGAGAGATGTGAAATTAAAGGGTTTGAGATACCAGCTAAGAGTAAGGTCATTGTTAATGCTTGGGCAATTGCTTGGGATCGAAATTACTGGATTGAAGCTGAGAAGTTTTGTCCAGAAAGGTTCCTTGATAGCTCAGTTGATTACAAAGGTTTAGATTATCAGTTTATACCATTTGGTGCTGGAAGGAGGATGTGTTCTGGTGTTACATTTGGCATTGCTAATGTTGAAATCATACTAGCAAATTTGCTTTTCCACTTTGATTGGAAGATGCCTAATGGAAATAAGCCTGAAGATTTAGACATGACTGAAATATTTAGCTTGTCTCTAAGTAGAAAATATGATCTGTATCTGATTCCTTATATGTATCACTCCTCTGCCAATTATTACCACTGTAAAGTGATTCTTGTTTATGCTCCAGAAGAGTGGGTGCGTTACTGTTAG 627 0.3716 MSELVKNPSMMERAQAEIRRVFDGKGHVDEANLHELKYLKSVIKETLRLHIPAPFLLPRECTERCEIKGFEIPAKSKVIVNAWAIAWDRNYWIEAEKFCPERFLDSSVDYKGLDYQFIPFGAGRRMCSGVTFGIANVEIILANLLFHFDWKMPNGNKPEDLDMTEIFSLSLSRKYDLYLIPYMYHSSANYYHCKVILVYAPEEWVRYC 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3081g00002 208 Pfam Cytochrome P450 3 168 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3081g00002 208 Gene3D Cytochrome P450 1 177 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3081g00002 208 PRINTS E-class P450 group I signature 81 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3081g00002 208 PRINTS E-class P450 group I signature 127 150 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3081g00002 208 PRINTS E-class P450 group I signature 117 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3081g00002 208 PRINTS E-class P450 group I signature 40 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3081g00002 208 FunFam Predicted protein 1 179 - -
Gabi3081g00002 208 PANTHER OS08G0105600 PROTEIN 1 184 - -
Gabi3081g00002 208 SUPERFAMILY Cytochrome P450 1 180 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3081g00002 208 PRINTS P450 superfamily signature 6 19 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3081g00002 208 PRINTS P450 superfamily signature 118 127 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3081g00002 208 PRINTS P450 superfamily signature 41 52 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3081g00002 Gabi-Chr3081 13447 14073 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3081g00002 1 181 Cytochrome P450 AT3G26210 46.703 4.45e-59 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3081g00002 - - gmx:100818000 312.383