Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3081g00001 ATGGTTGCTCCAGAGAAATGCATAGGGAATGTGGTGGCTGTGAAGAGTTCAATGCCTCACTCAATAGGTTCATTGATGAGAGAAGAAAGTATAATCAGATCGTTGATTGGTTGTGAAGAATTGCTTCAATGCCATTTTGGCCAATTCACTATTGAGAAGGGTGAATTCATCTATAATCTTGGCTTTCTTGCATTCATCAAGCTGGAGTTGTTCAAGAATGATGCTGAGTATTGTGATTTAAAGCCCGATAACATTCTTCTCTTTCCTTCATCCAAGAATGATGCAAAGTATCAACTCAAGATTGCAGATTTTGGATTGTCCAAGACTAAAGAAGAGATTATCAATGCTGAGAACCCTCCAACTTCAAAGGAGATGATTCCAACTACAAATGAGATGATGTACAAGCTTGCTGTCTTTGAAGAAGCACCAAAGATTCCTAATGGAATAAGTGAGGATTGCAGAGATTTCTTGAGCAAACTTTTCATCAAGAATCCTAGTCAGAGATGGACTGCTAGCAAGCTTCTCCACCATCCTTTTCTATTTTCTCCATATGATTCTTTTAGAGGTTATGAAAGATTTCATATGAGGAACCCTCCAACTTCAAAGGAGATGATTCCAACTACAAATGAGATGATGTACAAGCTTGCTGTCTTTGAAGAAGCACCAAAGATTCCTAATGGAGTAAGTGAGGATTGCAGAGATTTCTTGAGCAAACGTTTCATCAAGAATCCTAGTCAGAGATGGACTGCTAGCAAGCTTCTCCACCATCCTTTTCTATTTTCTCCATATGATTCTTTTAGAGGTTATGAAAGATTTCATATG 822 0.382 MVAPEKCIGNVVAVKSSMPHSIGSLMREESIIRSLIGCEELLQCHFGQFTIEKGEFIYNLGFLAFIKLELFKNDAEYCDLKPDNILLFPSSKNDAKYQLKIADFGLSKTKEEIINAENPPTSKEMIPTTNEMMYKLAVFEEAPKIPNGISEDCRDFLSKLFIKNPSQRWTASKLLHHPFLFSPYDSFRGYERFHMRNPPTSKEMIPTTNEMMYKLAVFEEAPKIPNGVSEDCRDFLSKRFIKNPSQRWTASKLLHHPFLFSPYDSFRGYERFHM 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3081g00001 274 ProSiteProfiles Protein kinase domain profile. 1 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3081g00001 274 Gene3D Transferase(Phosphotransferase) domain 1 70 122 - -
Gabi3081g00001 274 Gene3D Transferase(Phosphotransferase) domain 1 186 267 - -
Gabi3081g00001 274 SMART serkin_6 2 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3081g00001 274 SUPERFAMILY Protein kinase-like (PK-like) 74 186 IPR011009 -
Gabi3081g00001 274 SUPERFAMILY Protein kinase-like (PK-like) 208 263 IPR011009 -
Gabi3081g00001 274 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 119 182 - -
Gabi3081g00001 274 Gene3D Transferase(Phosphotransferase) domain 1 123 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3081g00001 Gabi-Chr3081 2253 5636 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3081g00001 10 235 MAP Kinase Kinase Kinase AT4G36950 25.581 9.81e-19 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gabi3081g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3081g00001 - - gmx:102664043 163.31