Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3077g00054 ATGGTTGTGGAATCAGACTTGCAGAAGTTGGAGTATCTCCAAGCCATTCTCAAGGAAACATTGCGCTTGTATCCACCAGGACCACTCAGTGTGCCACACGAGTCCATGGAAGACTGCATCGTTGGTGGATACCATGTGCCCGCTGGCACACGTCTCTTGACTAACATTTCAAAAATTCAACGAGATCCCCTGTTATATGTGCACCCGTTGGAGTTCCGCCCAGAGAGATTCCTCACAACACACAAGGACATTGATGTCAGGGGACAACATTTTGAATTGATTCCATTCGGTGCAGGCAGACGAATGTGTCCCGGTCTCTCATTCGCTCTTCAAACGATGCAACTAACACTTGCTACTCTGCTACAAGGGTTTGACATTGCGACTCTTGATGGAGGACCAGTCGATATGCTTGAACGTGTTGGGTTAACCAATATCAAAGCCTCTCCGCTCCGAGTCATTCTTACTCCGCGTCTCTCTGCCCATGCTTACGCTGAAATTTAA 501 0.481 MVVESDLQKLEYLQAILKETLRLYPPGPLSVPHESMEDCIVGGYHVPAGTRLLTNISKIQRDPLLYVHPLEFRPERFLTTHKDIDVRGQHFELIPFGAGRRMCPGLSFALQTMQLTLATLLQGFDIATLDGGPVDMLERVGLTNIKASPLRVILTPRLSAHAYAEI 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3077g00054 166 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 96 105 IPR017972 GO:0005506|GO:0016705
Gabi3077g00054 166 PRINTS P450 superfamily signature 103 114 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3077g00054 166 PRINTS P450 superfamily signature 94 103 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3077g00054 166 PRINTS P450 superfamily signature 15 26 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3077g00054 166 SUPERFAMILY Cytochrome P450 4 157 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3077g00054 166 Gene3D Cytochrome P450 1 164 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3077g00054 166 PRINTS E-class P450 group I signature 103 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3077g00054 166 PRINTS E-class P450 group I signature 93 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3077g00054 166 PRINTS E-class P450 group I signature 14 32 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3077g00054 166 PRINTS E-class P450 group I signature 55 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3077g00054 166 Pfam Cytochrome P450 5 139 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3077g00054 166 PANTHER CYTOCHROME P450 82C3-RELATED 2 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3077g00054 Gabi-Chr3077 448745 449360 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3077g00054 2 163 Cytochrome P450 AT4G31940 58.282 5.22e-63 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3077g00054 - - gmx:100778017 269.24