Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3077g00052 ATGGACCTGCAAAATTCCCTCTCCCAATCAACAGTACCATTGGCATTTACCATCTTTGGGCTGTTGTTATTTCTCTTAGTTCTTTCGTCAATATCGAGAAGGCGCACTGCTGCAGCTGGAAAAGCACCACCAGAAGCTAACGGTGCGTTGCCTTTGATTGGGCATCTCCACCTTTTAGGTGGTTCACAACCACCTTATGTAACCTTGGGCAACATGGCTGACAAGTATGGACCGGCATTCACCTTGCAGCTTGGTGTTCACCGAACTTTGATTGTGAGCAATTGGGAAATGGCTAAAGAGTGCTTTACTGTAAACGACAAAGCGTTTGCTAGCCGTCCTAAATCTGTAGCCTTTGAAGTGTTGGGATACAACTTTTCCATGTTTGGGTTCAGCCCCTACGGTTCCTATTGGCGTCACGTACGCAAGATAGCCACCATGGAGCTCCTCTCTACCAAGCGGATAGAGATGCTCAAGCACGTCATCGAATCGGAGGTGAAGGCAGCAATAAAAGGGAGTCACGATAATTGGTTAAAGATGAACAAGAGTGGTTCCGAAAATGCAGTGACTGATATGAACAAATGGTTCGGGGACATAATCCTAAACGTTATGTTTAGGTTGACGGTAGGAAAACGTTTTGGTGGGGTGAATTGTGATGGTGACCATGAAGAGAACGAATGGATCAGGAAAGCAGTAAGAGACTTTTTCGATCTCATGGGTTCAATAGTTGTCTCTGATGCACTGCCGTATTTGAGATGGTTGGATTTGGACGGAAAAGAGAAGGAAATGAAGAGGACAGCAAAAGAGTTAGACAGCTTTGTTCAAATTTGGCTCGAAGAACACAAACGTAACAGGAATTCTGGTTTAGGGGAATGGAAGCGCAAGCATGACTTCATGGATGCGCTTCTTTCCAATGTTGACGAAGGTGAACAGTTTGGCGGTTGTGATGCGGATACTGTTATTAAAGCTACGTGCCAGGGACTAATTTTAGCTGGCACAGACACTACCTCAGGGACATTGACTTGGGCTCTCTCCCTACTTCTCAACAACCGTGAAGTTCTAAACAAAGCCATACACGAATTAGACACACAAATTGGGAAGGATAAGATGGTCGTGGAATCAGACTTGCAGAAGTTGGAGTATCTCCCAGCCATTCTCAAGGAAACACTGCGCTTATATCCACCAGGACCACTCAGTGTGCCACACGAGTCCATGGAAGACTGCACCATTGGTGGATACCATGTGCCTGCTGGCACACGTCTCTTGACTAACATTTCAAAAATTCAACGAGATCCCCTGTTATATATGCACCCCTTGGAGTTCCGCCCAGAGAGATTCCTCACAACACACAAGGACATTGATGTCAGGGGACAACATTTTGAATTGATTCCATTCGGTGCAGGCAGAAGAATATGTCCTGGTCTCTCATTCGCTCTTCAAACGATGCACCTAACACTTGCTACTCTGCTACATGGGTTTGACATTGTGACTCCTGATGGAGGACCAGTCGATATGCTTGAATGTGTTGGGTTAACCAATAACAAAGCCTCTCCGCTCCGAGTCATTCTTACTCCGCGTCTCTCTGCCCATGCTTACCTTGAAATTTAA 1605 0.4586 MDLQNSLSQSTVPLAFTIFGLLLFLLVLSSISRRRTAAAGKAPPEANGALPLIGHLHLLGGSQPPYVTLGNMADKYGPAFTLQLGVHRTLIVSNWEMAKECFTVNDKAFASRPKSVAFEVLGYNFSMFGFSPYGSYWRHVRKIATMELLSTKRIEMLKHVIESEVKAAIKGSHDNWLKMNKSGSENAVTDMNKWFGDIILNVMFRLTVGKRFGGVNCDGDHEENEWIRKAVRDFFDLMGSIVVSDALPYLRWLDLDGKEKEMKRTAKELDSFVQIWLEEHKRNRNSGLGEWKRKHDFMDALLSNVDEGEQFGGCDADTVIKATCQGLILAGTDTTSGTLTWALSLLLNNREVLNKAIHELDTQIGKDKMVVESDLQKLEYLPAILKETLRLYPPGPLSVPHESMEDCTIGGYHVPAGTRLLTNISKIQRDPLLYMHPLEFRPERFLTTHKDIDVRGQHFELIPFGAGRRICPGLSFALQTMHLTLATLLHGFDIVTPDGGPVDMLECVGLTNNKASPLRVILTPRLSAHAYLEI 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3077g00052 534 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3077g00052 534 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3077g00052 534 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3077g00052 534 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3077g00052 534 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3077g00052 534 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3077g00052 534 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3077g00052 534 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3077g00052 534 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3077g00052 534 SUPERFAMILY Cytochrome P450 49 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3077g00052 534 CDD CYP82 77 525 - -
Gabi3077g00052 534 PANTHER CYTOCHROME P450 82C3-RELATED 21 531 - -
Gabi3077g00052 534 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3077g00052 534 PRINTS P450 superfamily signature 471 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3077g00052 534 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3077g00052 534 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3077g00052 534 Pfam Cytochrome P450 44 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3077g00052 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Gabi3077g00052 534 FunFam Cytochrome P450 82C4 33 523 - -
Gabi3077g00052 534 Gene3D Cytochrome P450 38 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3077g00052 Gabi-Chr3077 399147 402262 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3077g00052 17 532 Cytochrome P450 AT4G31940 49.715 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3077g00052 - - gmx:100778017 768.459