Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3077g00051 ATGATCACAAAACACCCACTTGTGATCCTTTTAGTTTTAGGTGTTGTATCAATCTTCCTTCCCATAATCACAGCCCAAGTGAACTACCGCGAGTGCCACCAAACATGCGGCTCAGCCAAACCTTTCCCTTATCCTTTTGGGTTTTCCTCCGGCTGCACAATCCGCCTCAACTGCACCCCCGACGGCGGAATCTACATCGGTGAATTCCCAGTCCTATCAGTAAACGCAGACGGCATAATCGTGGGCATCAAAGCCCTTTGCAATCGCCCATTTGATCGATTCCATCAACTCTTCAGCCACAAATACGCACCCACTTCAGCAAACGTGATCCTATTAAAGAACTGCACCGAAACGCTCTTGCCCTGCACGCTACCAGGGACCCTGGTGCAGACTCACTTTGAGTCTGAAGGTTGCAGCAGCAATTTTAGTTGCTACTTTGAGAACAACACGAGGGGCTTCGTGAGTGAACAAAATTTAGAGCAAATCGGGTGCGAGTACTTTATGTCGTCTATATCATCAGATGATTTAAGGTACAATTCGGGTGCGGCTGTGTCCTTGGAAGTAGCCACAATAGAGCTTGGATGGTGGCTTCAGGGAGATCAATGTCAATGTTCTGATCATGCCAATTGTTCCATAATTGAATCGCCGCTTGATAGAAAACCCGGGTTCCGGTGTCGCTGCAAGGAAGGGTTCGTCGGCGATGGGTTTTTGGCCGGAACAGGCTGCCACAAAGCCTCATCAGCATGCAACGCAGCGAAGTACCTGTCTGGCCAATGTGGAGGAACAGCGAAATTTGTTGTCTTAATTGGAGGATTTGTTTTCGGTGTTTCACTGATGATTACTCTGGGTTCATTATGTTGTTTCTTTCGCCGGCGCTCCAAATTGAGAGTGACAAAGAGCACAAAAAGGCGCTTAACTGAAGCCACTGGCAATTACAGCGTTCCTATCTATCCCTACAAAGACATTGAGAGAGCCACGAATAGCTTCTCAGAGAAACAACGGCTCGGAACTGGGGCATATGGGACAGTTTATGCTGGAAAACTTTACAATGATGAATGGGTTGCCATCAAAAGGATAAAACACAGAGACACCGACAGTATTGAGCAAGTAATGAATGAGATCAAGCTCCTTTCCTCGGTGAGCCACACCAATTTAGTTCGGTTGTTGGGTTGTACCATTGAATATGGAGAACAAATCCTTGTCTACGAGTTCATGCCCAACGGAACACTATGTCAGCATTTGCAAAGGGAGAGAGGGAATGGACTTCCATGGCAAGTTCGACTCACAATTGCCTTTGAAACAGCACAAGCCATAGCACATCTTCATTCAGCCATTAATCCCCCCATTTACCATAGAGATATCAAGTCAAGCAACATACTTTTGGACTACAATTTTGGATCCAAAGTAGCAGATTTTGGTCTTTCTAGACTTGGGATGACTGAAATATCCCACATTTCAACTGCCCCACAAGGAACCCCTGGCTACGTTGACCCACAGTACCATCAAGACTTTCACCTTTCTGATAAAAGTGATGTATATAGCTTCGGTGTTGTTCTTGTTGAGATCATAACAGGACTGAAAGTGGTGGACTTCTCTCGTCCTCATAATGAAGTAAATCTGGCTTCTCTTGCCGCAGATAGGATTGGGAAAGGGCTTTTGGATGAGATTATAGACCCATTCCTTGAGCAAGAAACAAGTAATGATGCTTGGACCCTTTCCTCCATACACAAGATGGCTGAGTTGGCATTCAGATGCCTTGCATTCCACAGGGATATGAGGCCTTCGATGACAGAAGTAGCAACAGAGCTAGAGCAGCTTAGGCATAGTAAGTGGACAACTTTAGGATACAACAATTGCACAACTTCGACGGAGTTGTCCTGTTGCTCTTCTTCCTCCAATGATAGTGAGAAACCACTAAGCACCATAGTGAATGTGGTTGGGCCAAAGGGTAAAGAAGAACATCTAAGCCTGCAAACAGGGCCCGTGAGCTTAAATTCAACTCAAAGGCCCAAAAGCAGGTCACCAGTCTCGGTGCAAGACCCAGACATGTGGTTGAGTGAACAGAGCTCTCCTTCGTCAAATAGTTTTCCGAGTAAGTCCTATGATTGA 2109 0.4599 MITKHPLVILLVLGVVSIFLPIITAQVNYRECHQTCGSAKPFPYPFGFSSGCTIRLNCTPDGGIYIGEFPVLSVNADGIIVGIKALCNRPFDRFHQLFSHKYAPTSANVILLKNCTETLLPCTLPGTLVQTHFESEGCSSNFSCYFENNTRGFVSEQNLEQIGCEYFMSSISSDDLRYNSGAAVSLEVATIELGWWLQGDQCQCSDHANCSIIESPLDRKPGFRCRCKEGFVGDGFLAGTGCHKASSACNAAKYLSGQCGGTAKFVVLIGGFVFGVSLMITLGSLCCFFRRRSKLRVTKSTKRRLTEATGNYSVPIYPYKDIERATNSFSEKQRLGTGAYGTVYAGKLYNDEWVAIKRIKHRDTDSIEQVMNEIKLLSSVSHTNLVRLLGCTIEYGEQILVYEFMPNGTLCQHLQRERGNGLPWQVRLTIAFETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFGSKVADFGLSRLGMTEISHISTAPQGTPGYVDPQYHQDFHLSDKSDVYSFGVVLVEIITGLKVVDFSRPHNEVNLASLAADRIGKGLLDEIIDPFLEQETSNDAWTLSSIHKMAELAFRCLAFHRDMRPSMTEVATELEQLRHSKWTTLGYNNCTTSTELSCCSSSSNDSEKPLSTIVNVVGPKGKEEHLSLQTGPVSLNSTQRPKSRSPVSVQDPDMWLSEQSSPSSNSFPSKSYD 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3077g00051 702 FunFam Wall-associated receptor kinase-like 20 405 615 - -
Gabi3077g00051 702 SUPERFAMILY Protein kinase-like (PK-like) 306 604 IPR011009 -
Gabi3077g00051 702 FunFam Wall-associated receptor kinase-like 14 isoform A 202 237 - -
Gabi3077g00051 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Gabi3077g00051 702 Gene3D Phosphorylase Kinase; domain 1 290 404 - -
Gabi3077g00051 702 Gene3D Laminin 201 237 - -
Gabi3077g00051 702 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 15 683 IPR044652 GO:0004672
Gabi3077g00051 702 SMART serkin_6 329 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3077g00051 702 ProSiteProfiles Protein kinase domain profile. 329 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3077g00051 702 ProSitePatterns Protein kinases ATP-binding region signature. 335 357 IPR017441 GO:0005524
Gabi3077g00051 702 MobiDBLite consensus disorder prediction 658 702 - -
Gabi3077g00051 702 MobiDBLite consensus disorder prediction 653 702 - -
Gabi3077g00051 702 Pfam Protein kinase domain 329 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3077g00051 702 Gene3D Transferase(Phosphotransferase) domain 1 405 623 - -
Gabi3077g00051 702 FunFam Wall-associated receptor kinase-like 14 296 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3077g00051 Gabi-Chr3077 380748 386047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3077g00051 1 696 Receptor kinase-like Gene Family AT2G23450 50.633 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gabi3077g00051 Pkinase 6.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3077g00051 - - gmx:100777480 1070.07